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View Structure Prediction Details

Protein: TNPO1_ARATH
Organism: Arabidopsis thaliana
Length: 891 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for TNPO1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-891]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAVVWQP RDDGLAEICS LLEQQISPSS VVDKSQIWKQ LQHFSQFPDF NNYLVFILVR  60
   61 AEGKSVEVRQ AAGLLLKNNL RGAYPSMTQE NQKYIKSELL PCLGAADRNI RTTVGTIISV 120
  121 IVNIEGVSGW HELLPALVTC LDSNDLNHMD GAMDALSKIC EDIPHVLDTE VPGLAERPIN 180
  181 IFLPRLLQFF QSPHASLRKL ALGSVNQYII IMPAALYNSL DKYLQGLFVL ANDPVPEVRK 240
  241 LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNRDPDEEVS LEACEFWSAY CDAQLPPENL 300
  301 KEFLPRLIPV LLENMAYADD DESLLDAEED ESQPDRDQDL KPRFHTSRLH GSEDFDDDDD 360
  361 DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQKNLS ASGDEAWKQR EAAVLALGAI 420
  421 AEGCMNGLYP HLSEIVAFLL PLLDDKFPLI RSISCWTLSR FGKYLIQESG NPKGYEQFEK 480
  481 VLMGLLRRLL DTNKRVQEAA CSAFATVEED AAEELVPHLG VILQHLMCAF GKYQRRNLRI 540
  541 VYDAIGTLAD SVREELNKPA YLEILMPPLV AKWQQLSNSD KDLFPLLECF TSISQALGVG 600
  601 FAPFAQPVFQ RCMDIIQLQQ LAKVNPASAG AQYDREFIVC SLDLLSGLAE GLGSGIESLV 660
  661 QQSNLRDLLL NCCIDEAADV RQSAFALMGD LARVFPVYLQ PRLLDFLEIA SQQLSANLNR 720
  721 ENLSVANNAC WAIGELAVKV RQEVSPIVAK VVSSLGLILQ HGEGVNKALV ENSAITLGRL 780
  781 AWIRPDLVAP HMDHFMKPWC MALSMVRDDI EKEDAFRGLC AVVKVNPSGG VSSLVFICQA 840
  841 IASWHEIRSE DVQTEVSQVL NGYKHMLGNS WAECLSALDP PVKERLARYQ V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 2qmrA
Description: No description for 2qmrA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle