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Protein Overview: gi|16410089, gi|...

General Information:
Name(s) found: gi|25514849 [NCBI NR]
gi|16410089 [NCBI NR]
Description(s) found:
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  • pir||AD1162 flagellar motor switch protein fliY homolog lmo0700 [imported] - Listeria monocytogenes (strain EGD-e) [NCBI NR]
  • gi|16410089|emb|CAC98778.1| lmo0700 [Listeria monocytogenes] [NCBI NR]
  • similar to flagellar motor switch protein fliY [Listeria monocytogenes EGD-e]gi|16410089|emb|CAC98778.1| lmo0700 [Listeria monocytogenes]gi|25514849|pir||AD1162 flagellar motor switch protein fliY homolog lmo0700 [imported] - Listeria monocytogenes (str [nrdb_11152004_Chlamydomonas]
    • Organism: Listeria monocytogenes
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLLEKNIT QMELDVIGEI ANISFGSAST VLSDLLHQQV TISTPKVEIV DLYNTKDIDI  60
   61 PHVVLEVNFH KGIEMRNLFV LQSEVAAAIA DLMMMGDGNI DPNEELSELH LSAVQEAMNQ 120
  121 MMGHSATAMS NMFGEMIDIT TPDIKVIALK EQLEDTNDQT MIKVGFDLII GDLITSNLMQ 180
  181 LIPVDKGREL AKRLLGDAVP EADPVKEEIS LTAEELDVFL EVCNIGIGSA STVLSKLLNR 240
  241 KVSLQIPTAR VIDSKEFEFN ERPCLVTSVE FVEGLRSSNT FIISKNAALI MADLMMMGDG 300
  301 IVQEDAELTE LEVSAVQELM NQMMGFSATA MSEMLGTKID ISPPTMEFCN FGDTMIQKNI 360
  361 EEGKTVEVIF PLEVDGLLKT PMYQIFNPAA AKEMAQLMLG IQAKEVAEKE ATTPAEIIEP 420
  421 EKPAEPIKHT VIEEKETLSE MEQILEDIPV TLEVVFGTAK VKLEKFISWC EKDVIILKES 480
  481 MNEPLVLALN GVTIGKGILV RVDDHFGIQM TELVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] PSI-BLAST 35.522879 X-ray Structure of Thermotoga maritima CheC
    2 View Details [206..406] PSI-BLAST 32.30103 No description for 2hp7A was found.
    3 View Details [407..515] PSI-BLAST 18.09691 Crystal structure of the c-terminal fragment of the putative flagelar motor switch protein FliN (TM0680a) from Thermotoga maritima at 1.85 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • motor activity
    		•  3.07201707618408 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.17271522721174 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.12849207458848 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.10878539079436 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.10781034885807 bayes_pls_golite062009
  • binding
    		•  0.851616221377121 bayes_pls_golite062009
  • hydrolase activity
    		•  0.325371951256 bayes_pls_golite062009
  • protein binding
    		•  0.253452523212299 bayes_pls_golite062009
  • catalytic activity
    		•  0.145477743192426 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle