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Protein Overview: gi|41583517, gi|...

General Information:
Name(s) found: gi|42519229 [NCBI NR]
gi|41583517 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|42519229|ref|NP_965159.1| hypothetical protein LJ1304 [Lactobacillus johnsonii NCC 533] [NCBI NR]
  • gi|41583517|gb|AAS09125.1| hypothetical protein LJ_1304 [Lactobacillus johnsonii NCC 533] [NCBI NR]
    • Organism: Lactobacillus johnsonii NCC 533
    Length: 265 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKVADIVAR LKKDFPEEIA SEGDPVGMQI GSMDADVTKV MTTLDVRPQV VDEAIEKGVD  60
   61 LIISHHPVMF RPAKNLDFAD PQNAMYGKLI ANGITVYSIH TNSDKAENGS ADWQAEELGL 120
  121 EEVEPFALDT DGIAIGRKGK LPKKMTAKEF AYYVKDKMQI PMARLITADN DRLISTVAFI 180
  181 CGDGGKFWRQ ALVDGVDAFI TGDVYYHVGH DMISSGLTVV DPGHYTEKLF KYKVGDRLEK 240
  241 WNQDYNWNVP VVISEVSTNP FQDLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] PSI-BLAST 79.39794 No description for 2fywA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.36275821588531 bayes_pls_golite062009
  • transcription factor binding
    		•  0.8197800099048 bayes_pls_golite062009
  • protein binding
    		•  0.188326419539465 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle