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Protein Overview: gi|51477443, gi|...

General Information:
Name(s) found: gi|51477443 [NCBI NR]
gi|42562078 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|51477443|gb|AAU04629.1| CENP-C [Arabidopsis thaliana] [NCBI NR]
  • gi|42562078|ref|NP_173018.2| CENP-C (CENTROMERE PROTEIN C) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 705 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chromosome, centromeric region [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVSRSSSL YTEEDPLQAY SGLSLFPRTL KSLSNPLPPS YQSEDLQQTH TLLQSMPFEI  60
   61 QSEHQEQAKA ILEDVDVDVQ LNPIPNKRER RPGLDRKRKS FSLHLTTSQP PPVAPSFDPS 120
  121 KYPRSEDFFA AYDKFELANR EWQKQTGSSV IDIQENPPSR RPRRPGIPGR KRRPFKESFT 180
  181 DSYFTDVINL EASEKEIPIA SEQSLESATA AHVTTVDREV DDSTVDTDKD LNNVLKDLLA 240
  241 CSREELEGDG AIKLLEERLQ IKSFNIEKFS IPEFQDVRKM NLKASGSNPP NRKSLSDIQN 300
  301 ILKGTNRVAV RKNSHSPSPQ TIKHFSSPNP PVDQFSFPDI HNLLPGDQQP SEVNVQPIAK 360
  361 DIPNTSPTNV GTVDVASPFN DSVVKRSGED DSHIHSGIHR SHLSRDGNPD ICVMDSISNR 420
  421 SSAMLQKNVD MRTKGKEVDV PMSESGANRN TGDRENDAEI NEETDNLERL AECASKEVTR 480
  481 PFTVEEDSIP YQQGASSKSP NRAPEQYNTM GGSLEHAEHN QGLHEEENVN TGSASGLQVE 540
  541 NAPEVHKYSH KQTNKRRKRG SSDSNVKKRS KTVHGETGGD KQMKTLPHES RAKKQTKGKS 600
  601 NEREEKKPKK TLTHEGKLFS CRKSLAAAGT KIEGGVRRST RIKSRPLEYW RGERFLYGRI 660
  661 HESLTTVIGI KYASPGEGKR DSRASKVKSF VSDEYKKLVD FAALH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] deduced N/A No confident structure predictions are available.
    2 View Details [202..347] deduced N/A No confident structure predictions are available.
    3 View Details [348..554] MSA 2.215996 View MSA. No confident structure predictions are available.
    4 View Details [555..705] MSA 1.186993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle