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Protein Overview: gi|18410372, gi|...

General Information:
Name(s) found: gi|31616517 [NCBI NR]
gi|18410372 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|31616517|gb|AAP55750.1| LAF3 isoform 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|18410372|ref|NP_567027.1| LAF3/LAF3 ISF1/LAF3 ISF2 (LONG AFTER FAR-RED 3); hydrolase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFVIVSAA VFLLISVAYL PLLNDLYWST LKSPTPPAGI VADLLVTNGT IFTSDSSLPF  60
   61 ADSMAIRNGR ILKVGSFATL KGFIGDGTME VNLEGKIVVP GLIDSHVHLI SGGLQMAQVG 120
  121 LRGVSQKDEF CKMVKDAVQN AKEGSWILGG GWNNDFWGGE LPSASWIDEI SPRNPVWLIR 180
  181 MDGHMALANS LALKIAGVIS LTEDPVGGTI MRMPSGEPTG LLIDAAMELV TPWVKEISVD 240
  241 ERREALFRAS KYALTRGVTT VIDLGRYFPG TTDELSWKDF QDVYLYADSS KKMMIRTCLF 300
  301 FPITTWSRLL DLKLQKGSVL SEWLYLGGVK AFIDGSLGSN SALFYEEYID TPNNYGLEVM 360
  361 DPEKLSNFTM AADKSGLQVA IHAIGDKAND MILDMYESVA AANGDRDRRF RIEHAQHLAP 420
  421 GSANRFGQLH IVASVQPDHL LDDADSVAKK LGSERAVKES YLFQSLLNGN ALLALGSDWP 480
  481 VADINPLHSI RTAVKRIPPK WDHAWIPSER ISFTDALIAQ TISAARAAFL DHHLGSLSPG 540
  541 KLADFVILST NSWDEFSKDV SASVLATYVG GKQLYP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..576] PSI-BLAST 18.69897 Crystal structure of D-aminoacylase in complex with 100mM CuCl2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  2.89663896697662 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • peptidase activity
    		•  0.531583397695361 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0416211123846697 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle