Protein Overview: PLET1_ARATH

General Information:
Name(s) found:	PLET1_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|79409851\|ref\|NP_188720.2\| PLT1 (PLETHORA 1); transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|75252568\|sp\|Q5YGP8.1\|PLET1_ARATH RecName: Full=AP2-like ethylene-responsive transcription factor PLT1; AltName: Full=Protein PLETHORA 1; AltName: Full=Protein AINTEGUMENTA-LIKE 3 [NCBI NR] gi\|46254987\|gb\|AAS86335.1\| PLETHORA1 [Arabidopsis thaliana] [NCBI NR] AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1 [Swiss-Prot] PLETHORA1 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Similar to ovule development protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: PLT1 \| PLT1 (PLETHORA 1); transcription factor \| chr3:7300770-7303376 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] PLT1 (PLETHORA 1); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: PLT1 \| Integrase-type DNA-binding superfamily protein \| chr3:7300764-7303370 FORWARD LENGTH=574 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	574 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA]
Biological Process:	root development [IGI][IMP] stem cell maintenance [IMP] regulation of transcription, DNA-dependent [ISS] pattern specification process [IMP]
Molecular Function:	transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV  60
   61 ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND VVVAACDSNT PNNSSYHELQ 120
  121 ESAHNLQSLT LSMGTTAGNN VVDKASPSET TGDNASGGAL AVVETATPRR ALDTFGQRTS 180
  181 IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQVYLGGY DKEDKAARSY DLAALKYWGP 240
  241 STTTNFPITN YEKEVEEMKH MTRQEFVAAI RRKSSGFSRG ASMYRGVTRH HQHGRWQARI 300
  301 GRVAGNKDLY LGTFSTEEEA AEAYDIAAIK FRGLNAVTNF EINRYDVKAI LESSTLPIGG 360
  361 GAAKRLKEAQ ALESSRKREA EMIALGSSFQ YGGGSSTGSG STSSRLQLQP YPLSIQQPLE 420
  421 PFLSLQNNDI SHYNNNNAHD SSSFNHHSYI QTQLHLHQQT NNYLQQQSSQ NSQQLYNAYL 480
  481 HSNPALLHGL VSTSIVDNNN NNGGSSGSYN TAAFLGNHGI GIGSSSTVGS TEEFPTVKTD 540
  541 YDMPSSDGTG GYSGWTSESV QGSNPGGVFT MWNE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..135]	deduced	N/A	No confident structure predictions are available.
2	View Details	[136..264]	Pfam	12.221849	No description for PF00847.12 was found. No confident structure predictions are available.
3	View Details	[265..412]	PSI-BLAST	21.69897	GCC-box binding domain
4	View Details	[413..574]	deduced	N/A	No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: PLET1_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: