| Protein: | PLET1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 574 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLET1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
400.0 | [0..43] | [574..1] |
|
|
279.0 | [0..3] | [574..2] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MNSNNWLGFP LSPNNSSLPP HEYNLGLVSD HMDNPFQTQE WNMINPHGGG GDEGGEVPKV 60
61 ADFLGVSKPD ENQSNHLVAY NDSDYYFHTN SLMPSVQSND VVVAACDSNT PNNSSYHELQ 120
121 ESAHNLQSLT LSMGT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-264] |
1 11 21 31 41 51
| | | | | |
1 TAGNNVVDKA SPSETTGDNA SGGALAVVET ATPRRALDTF GQRTSIYRGV TRHRWTGRYE 60
61 AHLWDNSCRR EGQSRKGRQV YLGGYDKEDK AARSYDLAAL KYWGPSTTTN FPITNYEKEV 120
121 EEMKHMTRQ
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | PF00847.12 |
| Description: | No description for PF00847.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [265-412] |
1 11 21 31 41 51
| | | | | |
1 EFVAAIRRKS SGFSRGASMY RGVTRHHQHG RWQARIGRVA GNKDLYLGTF STEEEAAEAY 60
61 DIAAIKFRGL NAVTNFEINR YDVKAILESS TLPIGGGAAK RLKEAQALES SRKREAEMIA 120
121 LGSSFQYGGG SSTGSGSTSS RLQLQPYP
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-574] |
1 11 21 31 41 51
| | | | | |
1 LSIQQPLEPF LSLQNNDISH YNNNNAHDSS SFNHHSYIQT QLHLHQQTNN YLQQQSSQNS 60
61 QQLYNAYLHS NPALLHGLVS TSIVDNNNNN GGSSGSYNTA AFLGNHGIGI GSSSTVGSTE 120
121 EFPTVKTDYD MPSSDGTGGY SGWTSESVQG SNPGGVFTMW NE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
