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Protein Overview: ceh-16

General Information:
Name(s) found: ceh-16 / CE37477 [WormBase]
Description(s) found:
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  • WBGene00000439 locus:ceh-16 Homeobox protein engrailed-like ceh-16 status:Confirmed UniProt:P34326 protein_id:CCD63316.1 [WormBase]
  • gi|71981670|ref|NP_498898.2| Homeobox family member (ceh-16) [Caenorhabditis elegans] [NCBI NR]
  • gi|68845650|sp|P34326.3|HM16_CAEEL RecName: Full=Homeobox protein engrailed-like ceh-16 [NCBI NR]
  • gi|52839849|gb|AAB37562.2| C.elegans homeobox protein 16 [Caenorhabditis elegans] [NCBI NR]
  • gi|49617178|gb|AAT67384.1| homeobox gene 16 [Caenorhabditis elegans] [NCBI NR]
  • Homeobox protein engrailed-like ceh-16 OS=Caenorhabditis elegans GN=ceh-16 PE=2 SV=3 [Swiss-Prot]
  • C.elegans homeobox protein 16 [Caenorhabditis elegans]gi|49617178|gb|AAT67384.1| homeobox gene 16 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE37477 WBGene00000439 locus:ceh-16 Engrailed homeotic protein status:Confirmed SW:P34326 protein_id:AAB37562.2 [wormpep150.fasta]
  • [wormpep130-phg-ecoli-orf-rand.fasta]
  • 37477 WBGene00000439 locus:ceh-16 Engrailed homeotic protein status:Confirmed SW:P34326 protein_id:AAB37562.2 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE37477 WBGene00000439 locus:ceh-16 Engrailed homeotic protein status:Confirmed UniProt:P34326 protein_id:AAB37562.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE37477 WBGene00000439 locus:ceh-16 Engrailed homeotic protein status:Confirmed UniProt:P34326 protein_id:AAB37562.2| [wormORF-contam.fasta]
  • Homeobox protein engrailed-like ceh-16 [nr-271106-contam.fasta]
  • homeobox gene 16 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C.elegans homeobox protein 16 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C.Elegans Homeobox family member (ceh-16) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE37477 WBGene00000439 locus:ceh-16 Engrailed homeotic protein status:Confirmed UniProt:P34326 protein_id:CCD63316.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE37477 WBGene00000439 locus:ceh-16 status:Confirmed UniProt:P34326 protein_id:CCD63316.1 Homeobox protein engrailed-like ceh-16 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    negative regulation of multicellular organism growth [IMPLink to PubMed article]
    epidermal cell fate specification [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    embryonic body morphogenesis [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    plasma membrane fusion [IGILink to PubMed article][IMPLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IMPLink to PubMed article]
    formation of anatomical boundary [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKFGIERI LSSPYPCPSP TISTPATSPS SISPTFASPN GTPNIASSMY PAWVFSTRYS  60
   61 DRPSAGPRHR KSRKRESTGS SGSSEEEKRP RTAFTGDQLD RLKTEFRESR YLTEKRRQEL 120
  121 AHELGLNESQ IKIWFQNKRA KLKKSTSSVP RDRCSSVTPN PHNHPSIHGG YQLMAQLAKV 180
  181 QARAYMP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..187] PSI-BLAST 26.39794 DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  3.57523737355937 bayes_pls_golite062009
  • DNA binding
    		•  3.00143272905695 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.89825020286436 bayes_pls_golite062009
  • transcription factor activity
    		•  2.53664874743748 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.84054423341798 bayes_pls_golite062009
  • binding
    		•  1.68817361068715 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.56629498736977 bayes_pls_golite062009
  • transcription activator activity
    		•  1.26247803652791 bayes_pls_golite062009
  • protein binding
    		•  1.16239587634422 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.14821760889085 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle