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Protein Overview: gi|52354179, gi|...

General Information:
Name(s) found: gi|79319936 [NCBI NR]
gi|52354181 [NCBI NR]
gi|52354179 [NCBI NR]
gi|22330247 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|79319936|ref|NP_001031189.1| binding [Arabidopsis thaliana] [NCBI NR]
  • gi|52354181|gb|AAU44411.1| hypothetical protein AT1G54385 [Arabidopsis thaliana] [NCBI NR]
  • gi|52354179|gb|AAU44410.1| hypothetical protein AT1G54385 [Arabidopsis thaliana] [NCBI NR]
  • gi|22330247|ref|NP_683432.1| binding [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: spliceosome assembly [IEA]
    nuclear mRNA splicing, via spliceosome [IEA]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNLNPILR QELANLDKDT ESRKSAMKAL KSYVKDLDSK AIPGFLAQVF ETKETNSLSG  60
   61 EYTISLYEIL ARVHGPNIVP QIDTIMSTIV KTLASSAGSF PLQQACSKVI PAIARYGIDP 120
  121 TTTEDKKRVI IHSLCKPLTD SLLASQESLT SGAALCLKAL VDSDNWRFAS DEMVNRVCQN 180
  181 VVVALDSNSN QTHLQMGLVM SLAKHNPLIV EAYARLLIHT GLRILGFGVS EGNSQKRLSA 240
  241 VQMLNFLMKC LDPRSIYSEV ELIIKEMERC QSDQMAYVRG AAYEAMMTSK RIAAELESKM 300
  301 EKGCRSVTGS NFSRRNCSSI VPDYSLSPES QTLGSFSGYD SPVESSPISH TSCNSEFDRR 360
  361 SVNRKLWRRD ENGGVVDISL KDGLFSRVTK GSTTVSDSPL VPYDTCENGD EFEGFLMESL 420
  421 RNTTPSPQRQ RSRRINAEDF NIFSTPRKLI SSLQYPDDVD LDHSDIQSPI LRGEREKTIG 480
  481 SRKNPKLRKQ FPTMVETMSS TITVSEDTAQ TQMITGKKKK KKMSYAKLVI AISFVVVALF 540
  541 ATVILMVNQD DDVGYYTVPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 55.154902 No description for 2pkgA was found.
    2 View Details [301..481] deduced N/A No confident structure predictions are available.
    3 View Details [482..560] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle