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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52354179, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNLNPILR QELANLDKDT ESRKSAMKAL KSYVKDLDSK AIPGFLAQVF ETKETNSLSG  60
   61 EYTISLYEIL ARVHGPNIVP QIDTIMSTIV KTLASSAGSF PLQQACSKVI PAIARYGIDP 120
  121 TTTEDKKRVI IHSLCKPLTD SLLASQESLT SGAALCLKAL VDSDNWRFAS DEMVNRVCQN 180
  181 VVVALDSNSN QTHLQMGLVM SLAKHNPLIV EAYARLLIHT GLRILGFGVS EGNSQKRLSA 240
  241 VQMLNFLMKC LDPRSIYSEV ELIIKEMERC QSDQMAYVRG AAYEAMMTSK RIAAELESKM 300
  301 EKGCRSVTGS NFSRRNCSSI VPDYSLSPES QTLGSFSGYD SPVESSPISH TSCNSEFDRR 360
  361 SVNRKLWRRD ENGGVVDISL KDGLFSRVTK GSTTVSDSPL VPYDTCENGD EFEGFLMESL 420
  421 RNTTPSPQRQ RSRRINAEDF NIFSTPRKLI SSLQYPDDVD LDHSDIQSPI LRGEREKTIG 480
  481 SRKNPKLRKQ FPTMVETMSS TITVSEDTAQ TQMITGKKKK KKMSYAKLVI AISFVVVALF 540
  541 ATVILMVNQD DDVGYYTVPT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle