Protein Overview: CF107_ARATH

General Information:
Name(s) found:	CF107_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|30725484\|gb\|AAP37764.1\| At3g17040 [Arabidopsis thaliana] [NCBI NR] gi\|20260426\|gb\|AAM13111.1\| unknown protein [Arabidopsis thaliana] [NCBI NR] gi\|15228944\|ref\|NP_188329.1\| HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding [Arabidopsis thaliana] [NCBI NR] Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana GN=HCF107 PE=1 SV=1 [Swiss-Prot] At3g17040 [Arabidopsis thaliana]gi\|20260426\|gb\|AAM13111.1\| unknown protein [Arabidopsis thaliana]gi\|15228944\|ref\|NP_188329.1\| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] \| Symbols: HCF107 \| HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107); binding \| chr3:5809384-5812611 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta] HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107) [Arabidopsis thaliana] [nr-271106-contam.fasta] At3g17040 [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: HCF107 \| high chlorophyll fluorescent 107 \| chr3:5809378-5812605 REVERSE LENGTH=652 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] At3g17040 OS=Arabidopsis thaliana GN=HCF107 PE=2 SV=1 [ARATH-contam.fasta]
Organism:	Arabidopsis thaliana
Length:	652 amino acids
Gene Ontology:
Cellular Component:	chloroplast [IDA] chloroplast envelope [IDA] plasma membrane [IDA]
Biological Process:	regulation of translation [IMP] RNA processing [IMP] plastid organization [IMP]
Molecular Function:	binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFFFVPNSS SSSPSPANTS SFSLSFLTPQ IPENLCKSPT KIHIGTHGIS GQSFLSHPTF  60
   61 SSKNTYLYAV VDRSSSGVFS PQKESANGEG EESNTEEGVL VVRRPLLENS DKESSEEEGK 120
  121 KYPARIDAGL SNIAKKMPIF EPERSESSSS SSAAAAARAQ ERPLAVNLDL SLYKAKVLAR 180
  181 NFRYKDAEKI LEKCIAYWPE DGRPYVALGK ILSKQSKLAE ARILYEKGCQ STQGENSYIW 240
  241 QCWAVLENRL GNVRRARELF DAATVADKKH VAAWHGWANL EIKQGNISKA RNLLAKGLKF 300
  301 CGRNEYIYQT LALLEAKAGR YEQARYLFKQ ATICNSRSCA SWLAWAQLEI QQERYPAARK 360
  361 LFEKAVQASP KNRFAWHVWG VFEAGVGNVE RGRKLLKIGH ALNPRDPVLL QSLGLLEYKH 420
  421 SSANLARALL RRASELDPRH QPVWIAWGWM EWKEGNTTTA RELYQRALSI DANTESASRC 480
  481 LQAWGVLEQR AGNLSAARRL FRSSLNINSQ SYVTWMTWAQ LEEDQGDTER AEEIRNLYFQ 540
  541 QRTEVVDDAS WVTGFLDIID PALDTVKRLL NFGQNNDNNR LTTTLRNMNR TKDSQSNQQP 600
  601 ESSAGREDIE TGSGFNLDVF LRSKLSLDPL KLDVNLDSKR LERFTRGRIN GA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..165]	deduced	N/A	No confident structure predictions are available.
2	View Details	[166..571]	PSI-BLAST	10.221849	No description for 2ooeA was found.
3	View Details	[572..652]	PSI-BLAST	12.39794	Helicobacter cysteine rich protein C (HcpC)

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.84

Protein Overview: CF107_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: