| Protein: | CF107_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 652 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CF107_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
426.0 | [0..7] | [643..3] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MHFFFVPNSS SSSPSPANTS SFSLSFLTPQ IPENLCKSPT KIHIGTHGIS GQSFLSHPTF 60
61 SSKNTYLYAV VDRSSSGVFS PQKESANGEG EESNTEEGVL VVRRPLLENS DKESSEEEGK 120
121 KYPARIDAGL SNIAKKMPIF EPERSESSSS SSAAAAARAQ ERPLA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-571] |
1 11 21 31 41 51
| | | | | |
1 VNLDLSLYKA KVLARNFRYK DAEKILEKCI AYWPEDGRPY VALGKILSKQ SKLAEARILY 60
61 EKGCQSTQGE NSYIWQCWAV LENRLGNVRR ARELFDAATV ADKKHVAAWH GWANLEIKQG 120
121 NISKARNLLA KGLKFCGRNE YIYQTLALLE AKAGRYEQAR YLFKQATICN SRSCASWLAW 180
181 AQLEIQQERY PAARKLFEKA VQASPKNRFA WHVWGVFEAG VGNVERGRKL LKIGHALNPR 240
241 DPVLLQSLGL LEYKHSSANL ARALLRRASE LDPRHQPVWI AWGWMEWKEG NTTTARELYQ 300
301 RALSIDANTE SASRCLQAWG VLEQRAGNLS AARRLFRSSL NINSQSYVTW MTWAQLEEDQ 360
361 GDTERAEEIR NLYFQQRTEV VDDASWVTGF LDIIDPALDT VKRLLN
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 2ooeA |
| Description: | No description for 2ooeA was found. |
| Term | Confidence | Notes |
| binding | 0.02652482814057 | bayes_pls_golite062009 |
|
Region A: Residues: [572-652] |
1 11 21 31 41 51
| | | | | |
1 FGQNNDNNRL TTTLRNMNRT KDSQSNQQPE SSAGREDIET GSGFNLDVFL RSKLSLDPLK 60
61 LDVNLDSKRL ERFTRGRING A
|
| Detection Method: | |
| Confidence: | 12.39794 |
| Match: | 1ouvA |
| Description: | Helicobacter cysteine rich protein C (HcpC) |
Matching Structure (courtesy of the PDB): |
|
