Protein Overview: GYS1_YEAST

General Information:
Name(s) found:	GYS1_YEAST [Swiss-Prot]
Description(s) found: Found 2 descriptions. SHOW ALL	Glycogen [starch] synthase isoform 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSY1 PE=1 SV=3 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	708 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARDLQNHLL FEVATEVTNR VGGIYSVLKS KAPVTVAQYG DNYTLLGPLN KATYESEVEK  60
   61 LDWEDESIFP EELLPIQKTL MSMREKGVNF VYGNWLIEGA PRVILFELDS VRHFLNEWKA 120
  121 DLWSLVGIPS PEHDHETNDA ILLGYVVVWF LGEVSKLDSS HAIIGHFHEW LAGVALPLCR 180
  181 KKRIDVVTIF TTHATLLGRY LCAAGDVDFY NNLQYFDVDQ EAGKRGIYHR YCIERAAAHT 240
  241 ADVFTTVSQI TALEAEHLLK RKPDGILPNG LNVVKFQAVH EFQNLHALKK DKINDFVRGH 300
  301 FHGCFDFDLD NTVYFFIAGR YEYKNKGADM FIESLARLNY RLKVSGSKKT VVAFLIMPAK 360
  361 TNSFTVEALK SQAIVKSLEN TVNEVTASIG KRIFEHTMRY PHNGLESELP TNLDELLKSS 420
  421 EKVLLKKRVL ALRRPYGELP PVVTHNMCDD ANDPILNQIR HVRLFNDSSD RVKVIFHPEF 480
  481 LNANNPILGL DYDEFVRGCH LGVFPSYYEP WGYTPAECTV MGVPSITTNV SGFGAYMEDL 540
  541 IETDQAKDYG IYIVDRRFKS PDESVEQLAD YMEEFVNKTR RQRINQRNRT ERLSDLLDWK 600
  601 RMGLEYVKAR QLGLRRAYPE QFKQLVGETI SDANMNTLAG GKKFKIARPL SVPGSPKVRS 660
  661 NSTVYMTPGD LGTLQDANNA DDYFNLSTNG AIDNDDDDND TSAYYEDN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..68]	deduced	N/A	No confident structure predictions are available.
2	View Details	[69..359]	MSA	1.421879	View MSA. No confident structure predictions are available.
3	View Details	[360..656]	MSA	277.951997	View MSA. No confident structure predictions are available.
4	View Details	[657..708]	deduced	N/A	No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
glycogen phosphorylase activity	4.85572378579745	bayes_pls_golite062009
phosphorylase activity	3.90117606315103	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	3.13569872928774	bayes_pls_golite062009
catalytic activity	2.42803950895063	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	2.09333759861004	bayes_pls_golite062009
glucosyltransferase activity	1.90464350723601	bayes_pls_golite062009
transferase activity	1.88974698466478	bayes_pls_golite062009
UDP-glycosyltransferase activity	1.65897712372683	bayes_pls_golite062009
UDP-glucosyltransferase activity	1.65637638312265	bayes_pls_golite062009
UDP-N-acetylglucosamine 2-epimerase activity	0.988654552791302	bayes_pls_golite062009
oxidoreductase activity	0.983614980754643	bayes_pls_golite062009
carbohydrate phosphatase activity	0.459821108931138	bayes_pls_golite062009
binding	0.45826376378159	bayes_pls_golite062009
alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	0.290421196423307	bayes_pls_golite062009
protein binding	0.228850008528478	bayes_pls_golite062009
sugar binding	0.0223079311271377	bayes_pls_golite062009

2

Term	Confidence	Notes
glycogen phosphorylase activity	5.43556332287206	bayes_pls_golite062009
phosphorylase activity	4.4363209226962	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	3.70184884300914	bayes_pls_golite062009
catalytic activity	2.65148466065976	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	2.62403914335522	bayes_pls_golite062009
glucosyltransferase activity	2.48423599937201	bayes_pls_golite062009
UDP-glucosyltransferase activity	2.22592863643386	bayes_pls_golite062009
transferase activity	2.18054407163329	bayes_pls_golite062009
UDP-glycosyltransferase activity	2.13085705769565	bayes_pls_golite062009
UDP-N-acetylglucosamine 2-epimerase activity	1.55280519670033	bayes_pls_golite062009
oxidoreductase activity	0.974556371594238	bayes_pls_golite062009
alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	0.849686864309466	bayes_pls_golite062009
carbohydrate phosphatase activity	0.78952375993773	bayes_pls_golite062009
binding	0.399722153246393	bayes_pls_golite062009
mannosyltransferase activity	0.253888301381021	bayes_pls_golite062009
protein binding	0.198267161626932	bayes_pls_golite062009
sugar binding	0.14686473522482	bayes_pls_golite062009
drug binding	0.102804615007901	bayes_pls_golite062009

3

No functions predicted.

4

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle