Protein Overview: TRI1_YEAST

General Information:
Name(s) found:	TRI1_YEAST [Swiss-Prot]
Description(s) found: Found 2 descriptions. SHOW ALL	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRI1 PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	226 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADINKYIPM VDAILSVSNP DEISPKRVRK ALQILYSVNL DSQRKLINEL ILERFGDIQE  60
   61 NPRVLIPKND LISRDQELSL RLQKEEERPL RSTRKRKGKS ESKSKRKKKK NDSPDSNSIS 120
  121 VRKVLLSAPL QKFLGSEELP RTQVVKMIWQ YIKEHDLQNP KDRREILCDE KMEPIFGKKM 180
  181 TMFSMNKLLT KHLFNPDEIV KHEEEQKQTP EKEIKLENES LPNLSG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..84]	MSA	7.038991	View MSA. No confident structure predictions are available.
2	View Details	[85..226]	Pfam	51.017729	SWIB/MDM2 domain No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	2.63842828741542	bayes_pls_golite062009
transcription regulator activity	2.62775554429027	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.953438255689584	bayes_pls_golite062009
histone binding	0.948950535074526	bayes_pls_golite062009
protein binding	0.529408559970229	bayes_pls_golite062009
specific RNA polymerase II transcription factor activity	0.439630834571696	bayes_pls_golite062009

2

Term	Confidence	Notes
transcription regulator activity	4.01592136607858	bayes_pls_golite062009
binding	3.20303599400601	bayes_pls_golite062009
basal transcription repressor activity	2.69162769894095	bayes_pls_golite062009
transcription coactivator activity	2.58234407051051	bayes_pls_golite062009
transcription repressor activity	1.98538788872171	bayes_pls_golite062009
transcription activator activity	1.83085389017135	bayes_pls_golite062009
transcription factor binding	1.73032563380905	bayes_pls_golite062009
transcription cofactor activity	1.60414428986898	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	1.51390743508971	bayes_pls_golite062009
protein binding	1.38134467541454	bayes_pls_golite062009
ligase activity	0.802664465339603	bayes_pls_golite062009
structural molecule activity	0.66106995897056	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.15313128037113	bayes_pls_golite062009
catalytic activity	0.121624777548864	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle