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Protein Overview: SNU66_YEAST

General Information:
Name(s) found: SNU66_YEAST [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNU66 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 587 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTENLSIE ETNEIREKLG MKPIPVFQEK NTDHKESLSI EETNELRASL GLKLIPPQQN  60
   61 FNSSPPNVHN TSKIDELREK ITKFQKKANA PLRMAHLLEE TNVNDDSSWL ENMDAIPSSH 120
  121 ESKRSSTLPR KGATKEDENI DLHNVQVSYN IEALSPKKDT ILTLKESSIF DDTDSTEVLE 180
  181 NVKAAEENAD REKLRLRQMN KDRRQKKKIL NVSSLDIEEE EEGEKHSITT THLIIGAEQG 240
  241 VMKAPNTISA KPPTGKVKVN FDSANNMSDE DGGDFKPLKI KKRKIKDPRS TKARKSKITD 300
  301 KMEIVKLVDE DESLSWMEEE QPVTIINPRT SSNNELKGPE DLAREIEKAR DEEKRRTESI 360
  361 LKMREISNSI VVDEKVTFLN TLDTSLSERS ATENKVKVHG EGEKNIGDVT NGHTKEGSGN 420
  421 NTLTEAVNNE PNYEGDAENA PNFFSGLAST LGYLRKKSVF TTGDVDLKPG KDVNNSESLR 480
  481 RDVRNKEHTG TGTYTKDKLH GLEQFTSSDS SNANTHSKRQ DHYDPDIKLV YRDEKGNRLT 540
  541 TKEAYKKLSQ KFHGTKSNKK KRAKMKSRIE ARKNTPENGS LFEFDDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..411] PSI-BLAST 2.09691 Heavy meromyosin subfragment
    2 View Details [412..587] MSA 2.020986 View MSA. No confident structure predictions are available.
    3 View Details [271..438] deduced N/A No confident structure predictions are available.
    4 View Details [439..587] FFAS03 0.96 Large T antigen, the N-terminal J domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.976140922616 bayes_pls_golite062009
  • protein binding
    		•  1.24691264244807 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.22205034569359 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.956364358495558 bayes_pls_golite062009
  • DNA binding
    		•  0.894959464232481 bayes_pls_golite062009
  • catalytic activity
    		•  0.137993331191769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle