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Protein Overview: gi|215694691, gi...

General Information:
Name(s) found: gi|52353416 [NCBI NR]
gi|215694691 [NCBI NR]
gi|115465219 [NCBI NR]
gi|113579760 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|52353416|gb|AAU43984.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694691|dbj|BAG89882.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115465219|ref|NP_001056209.1| Os05g0545000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113579760|dbj|BAF18123.1| Os05g0545000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLDRFAR PCFEGFTHND EKKEIRSDAD NSEGEKKTKI GSFKKKAINA GNKFRHSLRR  60
   61 RSKKKNEPRG SIEDIRDVQD LQAVDAFRQC LVDEDLLPQQ HDDYHTMLRF LKARKFDVEK 120
  121 AKSMWSDMLK WRKEFGADNI EEFDYTEADE VMKYYPQFYH GVDKEGRPIY IELIGKVDAN 180
  181 KLMQVTTIER YVKYHVKEFE RCFQMRFPAC SIAAKRPIDS STTILDVQGV GLKNFSKAAR 240
  241 DLITRLQKID NDNYPETLRR MYIINAGQGF KMLWSTVKSF LDPKTASKIH VLGSKYQNKL 300
  301 LEIIDENELP EFFGGKCKCE AFGGCKKSDK GPWKDPNIIK RVLNGEANYG RQIVTISSTD 360
  361 GKIIRYAGPQ YPTRKGSDGS AESGSEVEDG ASPMASRNLI TNPLLTPVHE ESKLAAHGFT 420
  421 SASPSIIEES IPVVDKVVDD GWGSPRASSS PSRSLPITFD GLWTQVITWL TVLIVSLFAM 480
  481 VRSVPSRMAK RFSSQSTDHD HSYVEYPQEA EYKEEFRPPS PAPSYTEKDV LSSMVRRLGE 540
  541 LEEKVQALET KPSEMPFEKE ELLNAAVRRV DALEAELIST KKALYEALMR QDELLAYIDK 600
  601 QDMIKFRKKK FCF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 53.0 PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE
    2 View Details [345..613] PSI-BLAST 19.69897 No description for 2nv5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phospholipid transporter activity
    		•  4.82372291869245 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.44932625048477 bayes_pls_golite062009
  • phosphatidylinositol transporter activity
    		•  3.08477039249457 bayes_pls_golite062009
  • binding
    		•  2.07034659478808 bayes_pls_golite062009
  • retinoid binding
    		•  1.4508809653482 bayes_pls_golite062009
  • isoprenoid binding
    		•  1.32450443851017 bayes_pls_golite062009
  • vitamin binding
    		•  0.87942237566918 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.658164745879483 bayes_pls_golite062009
  • protein binding
    		•  0.408110742195811 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.265815679858875 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle