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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215694691, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPLDRFAR PCFEGFTHND EKKEIRSDAD NSEGEKKTKI GSFKKKAINA GNKFRHSLRR  60
   61 RSKKKNEPRG SIEDIRDVQD LQAVDAFRQC LVDEDLLPQQ HDDYHTMLRF LKARKFDVEK 120
  121 AKSMWSDMLK WRKEFGADNI EEFDYTEADE VMKYYPQFYH GVDKEGRPIY IELIGKVDAN 180
  181 KLMQVTTIER YVKYHVKEFE RCFQMRFPAC SIAAKRPIDS STTILDVQGV GLKNFSKAAR 240
  241 DLITRLQKID NDNYPETLRR MYIINAGQGF KMLWSTVKSF LDPKTASKIH VLGSKYQNKL 300
  301 LEIIDENELP EFFGGKCKCE AFGGCKKSDK GPWKDPNIIK RVLNGEANYG RQIVTISSTD 360
  361 GKIIRYAGPQ YPTRKGSDGS AESGSEVEDG ASPMASRNLI TNPLLTPVHE ESKLAAHGFT 420
  421 SASPSIIEES IPVVDKVVDD GWGSPRASSS PSRSLPITFD GLWTQVITWL TVLIVSLFAM 480
  481 VRSVPSRMAK RFSSQSTDHD HSYVEYPQEA EYKEEFRPPS PAPSYTEKDV LSSMVRRLGE 540
  541 LEEKVQALET KPSEMPFEKE ELLNAAVRRV DALEAELIST KKALYEALMR QDELLAYIDK 600
  601 QDMIKFRKKK FCF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle