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Protein Overview: asd-2

General Information:
Name(s) found: asd-2 / CE37411 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00006423 locus:asd-2 status:Confirmed UniProt:G5EFF1 protein_id:CCD67595.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: P granule [IDA]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    positive regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCDNGVVSE ISDDKELLNL ETVIPPPPND SGHEFIGPSS GPPQVTITPS GVQSGSANGV  60
   61 STSQQQQYSA EYLSQLLKDK KQLAAFPNVF HHLERLADEE INKVRVVLFQ CEFSKESAPL 120
  121 PDAEGDSTVH TEKVFVPAKE HPDYNFVGRI LGPRGMTAKQ LEQETGCKIM VRGRGSMRDK 180
  181 KKEELNRGKP NWEHLSEELH VLIQCEDTEN RAKVKLMRAV EEVRKLLVPA PEGEDDLKRK 240
  241 QLMELAIING TYRSGTDQSA LAAAQLAAVK HQQQPFAAAL QAAALQRGVL PMMANGLSRS 300
  301 PTMAVCGAPI VMSPSGRASS AGATATSQAA LIMQQQSQLH AANAGNAALQ QQAALLQQQQ 360
  361 AAEYQQLLLS QAGLYDFSAM QQQYAAVGQN AAVAAAQAQA QAQYGALAAA AAANSAGNQQ 420
  421 YADYAGVDLT SQQSAHGGYY VRRWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..263] PSI-BLAST 44.69897 Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein.
    3 View Details [264..445] PSI-BLAST 3.09691 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • RNA binding
    		•  3.79066340213332 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.1702329067388 bayes_pls_golite062009
  • mRNA binding
    		•  2.45375256113953 bayes_pls_golite062009
  • binding
    		•  2.12000404411947 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.720255318931267 bayes_pls_golite062009
  • catalytic activity
    		•  0.483552478758071 bayes_pls_golite062009
  • protein binding
    		•  0.446932489882167 bayes_pls_golite062009
  • DNA binding
    		•  0.369815489813612 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle