| Protein: | asd-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MDCDNGVVSE ISDDKELLNL ETVIPPPPND SGHEFIGPSS GPPQVTITPS GVQSGSANGV 60
61 STSQQQQYSA EYLSQLLKDK KQLAAFPNVF HHLERLADEE INKVRVVLFQ CE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-263] |
1 11 21 31 41 51
| | | | | |
1 FSKESAPLPD AEGDSTVHTE KVFVPAKEHP DYNFVGRILG PRGMTAKQLE QETGCKIMVR 60
61 GRGSMRDKKK EELNRGKPNW EHLSEELHVL IQCEDTENRA KVKLMRAVEE VRKLLVPAPE 120
121 GEDDLKRKQL MELAIINGTY RSGTDQSALA A
|
| Detection Method: | |
| Confidence: | 44.69897 |
| Match: | 2bl5A |
| Description: | Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.79066340213332 | bayes_pls_golite062009 |
| nucleic acid binding | 3.1702329067388 | bayes_pls_golite062009 |
| mRNA binding | 2.45375256113953 | bayes_pls_golite062009 |
| binding | 2.12000404411947 | bayes_pls_golite062009 |
| transcription regulator activity | 0.720255318931267 | bayes_pls_golite062009 |
| catalytic activity | 0.483552478758071 | bayes_pls_golite062009 |
| protein binding | 0.446932489882167 | bayes_pls_golite062009 |
| DNA binding | 0.369815489813612 | bayes_pls_golite062009 |
|
Region A: Residues: [264-445] |
1 11 21 31 41 51
| | | | | |
1 AQLAAVKHQQ QPFAAALQAA ALQRGVLPMM ANGLSRSPTM AVCGAPIVMS PSGRASSAGA 60
61 TATSQAALIM QQQSQLHAAN AGNAALQQQA ALLQQQQAAE YQQLLLSQAG LYDFSAMQQQ 120
121 YAAVGQNAAV AAAQAQAQAQ YGALAAAAAA NSAGNQQYAD YAGVDLTSQQ SAHGGYYVRR 180
181 WA
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
