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Protein Overview: vbh-1

General Information:
Name(s) found: vbh-1 / CE37437 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00006888 locus:vbh-1 status:Partially_confirmed UniProt:Q65XX1 protein_id:CCD72828.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 660 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    P granule [IDA]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGGVFYNG FANGTPSNNG YAIQQPMVPG MGQMMGAPHA GFVPSPYFQG QPQQQQHFKM  60
   61 GYSENFENFD ENGSSGYNNF ADSGNGFNNN GAESNQWGGA PAEYSESNLF HRTDSGINFD 120
  121 KYENIPVEVS GDSVPAAIEH FNEAGFGPAV MENVNRSGYS KPTPVQKHSI PTLLANRDLM 180
  181 SCAQTGSGKT AAFLLPIIQH ILAGGPDMVK PPAFTNGRRT YYPCALVLSP TRELAIQIHK 240
  241 EATKFSYKSN IQTAILYGGR ENYRDQVNRL RAGTHILIAT PGRLIDIIEQ GFIGLAGCRY 300
  301 LVLDEADRML DMGFEPQIRK IVGQGMPPKT ARTTAMFSAT FPKEIQVLAK DFLKDNYIFL 360
  361 AVGRVGSTSE NIEQRLLWVN EMEKRSNLME ILMNEHSENL VLVFVETKRG ANELAYFLNR 420
  421 QQIRSVSIHG DLKQIERERN LELFRSGQCP ILVATAVAAR GLDIPNVRHV INYDLPGDSD 480
  481 EYVHRIGRTG RCGNLGIATS FFNDKNRGIG RDLKNLIVES NQEVPEWLHQ VAAEGRIGGG 540
  541 QRGGNRRFGA TDYRVGRGGG GSFGGNFSNY NSGGATGGFG SGPAYGGSFG GGAPRRPFTN 600
  601 GGFGAHSSLS STSNSGGGGG FSGPRRGGFN SGMNRQGGGG GGFYSNPGQA PIDHWQAPQA 660
  661

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] deduced N/A No confident structure predictions are available.
    2 View Details [139..535] PSI-BLAST 105.0 No description for 2i4iA was found.
    3 View Details [536..660] PSI-BLAST 19.69897 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle