YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: EG10348

General Information:
Name(s) found: fucA / EG10348 [EcoGene]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • L-fuculose-1-phosphate aldolase / L-fuculose-1-phosphate aldolase [EcoGene]
    • Organism: Escherichia coli str. K-12 substr. MG1655
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: D-arabinose catabolic process [IMPLink to PubMed article]
    L-fucose catabolic process [IMPLink to PubMed article]
    Molecular Function: aldehyde-lyase activity [IDALink to PubMed article]
    L-fuculose-phosphate aldolase activity [IDALink to PubMed article][IEA]
    zinc ion binding [IEA]
    protein binding [IPILink to PubMed article]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERNKLARQI IDTCLEMTRL GLNQGTAGNV SVRYQDGMLI TPTGIPYEKL TESHIVFIDG  60
   61 NGKHEEGKLP SSEWRFHMAA YQSRPDANAV VHNHAVHCTA VSILNRSIPA IHYMIAAAGG 120
  121 NSIPCAPYAT FGTRELSEHV ALALKNRKAT LLQHHGLIAC EVNLEKALWL AHEVEVLAQL 180
  181 YLTTLAITDP VPVLSDEEIA VVLEKFKTYG LRIEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 54.30103 L-fuculose-1-phosphate aldolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-ribulose-phosphate 4-epimerase activity
    		•  3.50507333471987 bayes_pls_golite062009
  • L-fuculose-phosphate aldolase activity
    		•  2.43949811564444 bayes_pls_golite062009
  • catalytic activity
    		•  1.9511172460719 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  1.08084403816388 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.42493443904865 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.15063402811264 bayes_pls_golite062009
  • isomerase activity
    		•  0.0458367676418101 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle