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Protein Overview: APG_ORYSJ

General Information:
Name(s) found: APG_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group] [NCBI NR]
  • Transcription factor APG OS=Oryza sativa subsp. japonica GN=APG PE=1 SV=1 [Swiss-Prot]
  • hypothetical protein [Oryza sativa (japonica cultivar-group)]gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os05g0139100 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • hypothetical protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 505 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRGNDTGSD LAELLWDNGA PAPLRPPPPP PFQPFTCSAA ATTSPPAHDY LFIKNLMRGG  60
   61 GAANHHHHDD DDDDDDDVPW LHYHPVVDDD DDADADTAPL PPDYCAALLS GLSDHLPPPA 120
  121 AAASRVDPDP CSSSHGAVVP STSAAAAKQA RTSGGGGGGV MNFTFFSRPL QQRPSGGETA 180
  181 SASASAAATS TVPVESTVVQ AATNRLRSTP LFSDQRMAWL HPPKPSPRAA APPPPPPLAP 240
  241 TTRHRLDTAA ATATVAQRLP PSEARAPDAP PPAATATATT SSVCSGNGDR RQLNWRDSHN 300
  301 NQSAEWSASQ DELDLDDELA GVHRRSAARS SKRSRTAEVH NLSERRRRDR INEKMRALQE 360
  361 LIPNCNKIDK ASMLEEAIEY LKTLQLQVQM MSMGTGMFVP PMMLPAAAAA MQHHHMQMQQ 420
  421 MAGPMAAAAH FPHLGAAAAM GLAGFGMPAA AQFPCPMFPA APPMSMFAPP PPPPPFPHAA 480
  481 ATAVEQTPSP PGAADAGNAP AVKQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] MSA 1.228996 View MSA. No confident structure predictions are available.
    2 View Details [140..329] deduced N/A No confident structure predictions are available.
    3 View Details [330..420] PSI-BLAST 8.154902 Myc prot-oncogene protein
    4 View Details [421..505] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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