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Protein Overview: gi|42562033, gi|...

General Information:
Name(s) found: gi|51536480 [NCBI NR]
gi|42562033 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|51536480|gb|AAU05478.1| At1g13130 [Arabidopsis thaliana] [NCBI NR]
  • gi|42562033|ref|NP_172772.2| glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 552 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKEPKHMF FIFPFFCFFF SFIAQNTVPN MSYPLSTSSR WIVDENGLRV KLVCANWPSH  60
   61 LQPVVAEGLS KQPVDAVAKK IVEMGFNCVR LTWPLDLMTN ETLANNVTVR QSFQSLGLND 120
  121 DIVGFQTNNP SIIDLPLIEA YKTVVTTLGN NDVMVILDNH LTKPGWCCAN DDGNGFFGDQ 180
  181 FFDPTVWVAA LKKMAATFNG VSNVVGMSLR NELRGPKQNV NDWFKYMQQG AEAVHSANNK 240
  241 VLVILSGLSF DADLSFVRSR PVKLSFTGKL VFELHWYSFS DGNSWAANNP NDICGRVLNR 300
  301 IGNGGGYLLN QGFPLFLSEF GIDERGVNTN DNRYFGCLTG WAAENDVDWS LWALTGSYYL 360
  361 RQGKVGMNEY YGVLDSDWIS VRNSSFLQKI SFLQSPLQGP GPRTDAYNLV FHPLTGLCIV 420
  421 RSLDDPKMLT LGPCNSSEPW SYTKKALRIK DQQLCLQSNG PKNPVTMTRT SCSTSGSKWQ 480
  481 TISASRMHLA STTSNKTSLC LDVDTANNVV ANACKCLSKD KSCEPMSQWF KIIKATRPLK 540
  541 SSRLYKEISS ML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] FFAS03 2.33 No description for 2osxA was found.
    2 View Details [104..552] PSI-BLAST 31.522879 Xylan binding domain, CBM13 (Endo-1,4-beta-xylanase C-terminal domain); Xylanase A, catalytic core


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle