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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42562033, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKEPKHMF FIFPFFCFFF SFIAQNTVPN MSYPLSTSSR WIVDENGLRV KLVCANWPSH  60
   61 LQPVVAEGLS KQPVDAVAKK IVEMGFNCVR LTWPLDLMTN ETLANNVTVR QSFQSLGLND 120
  121 DIVGFQTNNP SIIDLPLIEA YKTVVTTLGN NDVMVILDNH LTKPGWCCAN DDGNGFFGDQ 180
  181 FFDPTVWVAA LKKMAATFNG VSNVVGMSLR NELRGPKQNV NDWFKYMQQG AEAVHSANNK 240
  241 VLVILSGLSF DADLSFVRSR PVKLSFTGKL VFELHWYSFS DGNSWAANNP NDICGRVLNR 300
  301 IGNGGGYLLN QGFPLFLSEF GIDERGVNTN DNRYFGCLTG WAAENDVDWS LWALTGSYYL 360
  361 RQGKVGMNEY YGVLDSDWIS VRNSSFLQKI SFLQSPLQGP GPRTDAYNLV FHPLTGLCIV 420
  421 RSLDDPKMLT LGPCNSSEPW SYTKKALRIK DQQLCLQSNG PKNPVTMTRT SCSTSGSKWQ 480
  481 TISASRMHLA STTSNKTSLC LDVDTANNVV ANACKCLSKD KSCEPMSQWF KIIKATRPLK 540
  541 SSRLYKEISS ML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle