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Protein Overview: gi|240255969, gi...

General Information:
Name(s) found: gi|240255969 [NCBI NR]
gi|23506021 [NCBI NR]
gi|16323155 [NCBI NR]
Description(s) found:
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  • gi|240255969|ref|NP_567526.4| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|23506021|gb|AAN28870.1| At4g17250/dl4660w [Arabidopsis thaliana] [NCBI NR]
  • gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w [Arabidopsis thaliana] [NCBI NR]
  • At4g17250/dl4660w [Arabidopsis thaliana]gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 AT4g17250/dl4660w [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • AT4g17250/dl4660w [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g17250/dl4660w [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:9671104-9673329 FORWARD LENGTH=741 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g17250/dl4660w OS=Arabidopsis thaliana GN=At4g17250 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 741 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: heat acclimation [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCDSHGNLS DTEFSKPLPS IGVYVAAASL ICGVAMFSDL LHGFRHRKFW FPCKFFSLNA  60
   61 TTLTFISVCV KLSLDLNTSM PSRQDQLAKL SSSVFVCTVM ANSMPSLGYM VTQDLLMNLT 120
  121 ALGILVITDV VNICIQLGTG AIYVFPQEHA LVIILMLLMF MILSFSAITV PATKRFLELK 180
  181 YKKRYEFALK QCPSYTERRR GVPKLKEDLM KFWMMAHTSS PQFVMARSVT CTTTGFLCFL 240
  241 IAITLAEAMV RSYFLQPRSL GFCNGDSDYK WSTTLVLVSQ TAAVAIGTVA PASRWLKAVN 300
  301 FRCPFRNKKS LKDELRVESY WVECLAEKKE RPLNFWMLHG RCSRKLAHDL NRLMLDICIA 360
  361 TQYGIVLASK FLRFITVYCS SRILLCCFHF TFKSDSVANA ESSGSNPSTR QFVLHLEGEE 420
  421 EMVDYMARSN RVATDHLIQK GRKKQPVNLI ELLEATTFIS KGFEGIRDFD SDEVSSLASG 480
  481 EPPNSWALPL VTLTSIAVAL PNIKPCSLKK LVKAVNEALV YVNKFEEVLD IEGELANSRK 540
  541 AAEVVWLGVD LYHKWLNVDL RKLSKQHSKT PQEVLKELVD IAQKEFTESW EKNRILCMKH 600
  601 KPSHWPIKTQ AANSMYRISQ TLLMKYESRN IETEETLLKD VEKMVSDIVS GCFCNTAQVI 660
  661 GMKCLVTAVE VREASVREAA MHLGRTEKIL EIVDRRCMPA LSHHKVAKID EWREFYRTNK 720
  721 SITFTHPSSQ CTTRELIINL E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] deduced N/A No confident structure predictions are available.
    2 View Details [105..266] deduced N/A No confident structure predictions are available.
    3 View Details [267..395] deduced N/A No confident structure predictions are available.
    4 View Details [396..630] deduced N/A No confident structure predictions are available.
    5 View Details [631..741] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle