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Protein Overview: gi|23397271, gi|...

General Information:
Name(s) found: gi|23397271 [NCBI NR]
gi|145333717 [NCBI NR]
gi|110741459 [NCBI NR]
Description(s) found:
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  • gi|23397271|gb|AAN31917.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145333717|ref|NP_001078426.1| ubiquitin thiolesterase/ zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|110741459|dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Hypothetical protein At4g22290 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ubiquitin thiolesterase/ zinc ion binding | chr4:11779075-11781910 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ubiquitin C-terminal hydrolases superfamily protein | chr4:11779063-11781898 REVERSE LENGTH=541 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At4g22285 OS=Arabidopsis thaliana GN=At4g22290 PE=2 SV=1 [ARATH-contam.fasta]
  • Putative uncharacterized protein At4g22285 OS=Arabidopsis thaliana GN=At4g22285 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: zinc ion binding [IEA]
    ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLGFNNPL LPLANTYDDD DEEEENEQKK  60
   61 SQARGNGVAK GEGNGNKVKG EAQEEVDDDE DDDVSKGKGK HSRHVEVRRD CPYLDTVNRQ 120
  121 VLDFDFERFC SVSLSNLNVY ACLVCGKYFQ GRSQKSHAYT HSLEAGHHVY INLLTEKVYC 180
  181 LPDSYEINDP SLDDIRHVLN PRFSRAQVNE LDKNRQWSRA LDGSDYLPGM VGLNNIQKTE 240
  241 FVNVTIQSLM RVTPLRNFFL IPENYQHCKS PLVHRFGELT RKIWHARNFK GQVSPHEFLQ 300
  301 AVMKASKKRF RIGQQSDPVE FMSWLLNTLH MDLRTSKDAS SIIHKCFQGE LEVVKEFQGN 360
  361 ENKEISRMSF LMLGLDLPPP PLFKDVMEKN IIPQVALFDL LKKFDGETVT EVVRPKLARM 420
  421 RYRVIKSPRY LMFHMVRFKK NNFFKEKNPT LVNFPVKDME LRDYIPSLPR APEGENVCSK 480
  481 YNLIANIVHD GKPEDGYFRV FVQRKSQELW YEMQDLHVAE TLPQMVELSE AYMQIYEQEE 540
  541 E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..209] PSI-BLAST 12.0 No description for 3c5kA was found.
    3 View Details [210..541] PSI-BLAST 54.69897 No description for 2ibiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle