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Protein Overview: AMY3_ARATH

General Information:
Name(s) found: AMY3_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 887 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: starch catabolic process [TAS]
    Molecular Function: alpha-amylase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVPIESLL HHSYLRHNSK VNRGNRSFIP ISLNLRSHFT SNKLLHSIGK SVGVSSMNKS  60
   61 PVAIRATSSD TAVVETAQSD DVIFKEIFPV QRIEKAEGKI YVRLKEVKEK NWELSVGCSI 120
  121 PGKWILHWGV SYVGDTGSEW DQPPEDMRPP GSIAIKDYAI ETPLKKLSEG DSFFEVAINL 180
  181 NLESSVAALN FVLKDEETGA WYQHKGRDFK VPLVDDVPDN GNLIGAKKGF GALGQLSNIP 240
  241 LKQDKSSAET DSIEERKGLQ EFYEEMPISK RVADDNSVSV TARKCPETSK NIVSIETDLP 300
  301 GDVTVHWGVC KNGTKKWEIP SEPYPEETSL FKNKALRTRL QRKDDGNGSF GLFSLDGKLE 360
  361 GLCFVLKLNE NTWLNYRGED FYVPFLTSSS SPVETEAAQV SKPKRKTDKE VSASGFTKEI 420
  421 ITEIRNLAID ISSHKNQKTN VKEVQENILQ EIEKLAAEAY SIFRSTTPAF SEEGVLEAEA 480
  481 DKPDIKISSG TGSGFEILCQ GFNWESNKSG RWYLELQEKA DELASLGFTV LWLPPPTESV 540
  541 SPEGYMPKDL YNLNSRYGTI DELKDTVKKF HKVGIKVLGD AVLNHRCAHF KNQNGVWNLF 600
  601 GGRLNWDDRA VVADDPHFQG RGNKSSGDNF HAAPNIDHSQ DFVRKDIKEW LCWMMEEVGY 660
  661 DGWRLDFVRG FWGGYVKDYM DASKPYFAVG EYWDSLSYTY GEMDYNQDAH RQRIVDWINA 720
  721 TSGAAGAFDV TTKGILHTAL QKCEYWRLSD PKGKPPGVVG WWPSRAVTFI ENHDTGSTQG 780
  781 HWRFPEGKEM QGYAYILTHP GTPAVFFDHI FSDYHSEIAA LLSLRNRQKL HCRSEVNIDK 840
  841 SERDVYAAII DEKVAMKIGP GHYEPPNGSQ NWSVAVEGRD YKVWETS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] PSI-BLAST 17.0 No description for 2j44A was found.
    2 View Details [259..376] deduced N/A No confident structure predictions are available.
    3 View Details [377..468] MSA 1.567995 View MSA. No confident structure predictions are available.
    4 View Details [469..887] PSI-BLAST 54.0 CRYSTAL AND MOLECULAR STRUCTURE OF BARLEY ALPHA-AMYLASE


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle