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Protein Overview: SNF4_ARATH

General Information:
Name(s) found: SNF4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75037070|gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] [NCBI NR]
  • gi|23308443|gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] [NCBI NR]
  • gi|18390971|ref|NP_563834.1| SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator [Arabidopsis thaliana] [NCBI NR]
  • gi|16612255|gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] [NCBI NR]
  • Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=1 [Swiss-Prot]
  • At1g09020/F7G19_11 [Arabidopsis thaliana]gi|16612255|gb|AAL27498.1| At1g09020/F7G19_11 [Arabidopsis thaliana]gi|18390971|ref|NP_563834.1| protein kinase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATSNF4, SNF4 | SNF4 (Sucrose NonFermenting 4) | chr1:2900152-2904215 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g09020/F7G19_11 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AKINbetagamma [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SNF4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4); protein kinase activator [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose nonfermenting 4 | chr1:2900149-2904212 REVERSE LENGTH=487 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular response to glucose starvation [IDA]
    Molecular Function: protein kinase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ  60
   61 VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF ITGPDMVPAG FSPETLGRSN 120
  121 MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP 180
  181 VKQAFHILYE QGIPLAPLWD FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA 240
  241 AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY 300
  301 PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH 360
  361 ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA KDKAYAQIHL DDMTVHQALQ 420
  421 LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV 480
  481 FQFLLGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 29.09691 Glycogen-Binding Domain Of The Amp-Activated Protein Kinase beta2 Subunit
    2 View Details [111..487] PSI-BLAST 44.154902 No description for 2v8qE was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • phosphorylase kinase regulator activity
    		•  8.18623772563485 bayes_pls_golite062009
  • AMP-activated protein kinase activity
    		•  7.98159515020845 bayes_pls_golite062009
  • cAMP-dependent protein kinase inhibitor activity
    		•  7.37900747121671 bayes_pls_golite062009
  • cAMP-dependent protein kinase regulator activity
    		•  2.72879349930537 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.65736716029442 bayes_pls_golite062009
  • protein kinase activity
    		•  2.63659198898943 bayes_pls_golite062009
  • kinase activity
    		•  2.51764884377633 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.42131903112048 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  2.33489933634525 bayes_pls_golite062009
  • transferase activity
    		•  1.67087201309072 bayes_pls_golite062009
  • binding
    		•  1.59201750877601 bayes_pls_golite062009
  • protein kinase binding
    		•  1.55645492554893 bayes_pls_golite062009
  • kinase binding
    		•  1.51987207051111 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.42659032865959 bayes_pls_golite062009
  • protein binding
    		•  1.3720766721692 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.02079783694575 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.808206044972536 bayes_pls_golite062009
  • protein kinase regulator activity
    		•  0.49157430744145 bayes_pls_golite062009
  • kinase regulator activity
    		•  0.44703917270274 bayes_pls_golite062009
  • enzyme binding
    		•  0.36894766018324 bayes_pls_golite062009
  • PDZ domain binding
    		•  0.26231792801562 bayes_pls_golite062009
  • catalytic activity
    		•  0.181756622780318 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle