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Protein Overview: gi|110743267, gi...

General Information:
Name(s) found: gi|42569581 [NCBI NR]
gi|30102538 [NCBI NR]
gi|110743267 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|42569581|ref|NP_180855.2| tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30102538|gb|AAP21187.1| At2g32960 [Arabidopsis thaliana] [NCBI NR]
  • gi|110743267|dbj|BAE99524.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: dephosphorylation [IEA]
    Molecular Function: catalytic activity [ISS]
    protein tyrosine phosphatase activity [IEA]
    phosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIEKTMSM NQFRTMEEEK QDGGELFHTI EVAKVDRNNV SQPPPAATAA LLEVPGDELN  60
   61 LIPPLNFSMV DNGIFRSGFP DSANFSFIKT LGLRSIISLC PEPYPENNMQ FLKSNGISLF 120
  121 QFGIEGSKSK CLPGLENEVW LHIWSSKHQK EDFYTNGNSK TSEPFVDILD QKIREALKVL 180
  181 LDEKNHPLLI HCKRGKHRTG CLVGCMRKLQ KWCITSILDE YKRFAAAKAR VSDQRFLESF 240
  241 DVSGLKHTPM SFSCSNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 48.09691 X-ray structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana gene AT1G05000

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  7.30669036331612 bayes_pls_golite062009
  • phosphatase activity
    		•  6.6585143972081 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.44546424348532 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.56007278295923 bayes_pls_golite062009
  • protein tyrosine phosphatase activity
    		•  5.3097342170423 bayes_pls_golite062009
  • hydrolase activity
    		•  4.08088661270715 bayes_pls_golite062009
  • transmembrane receptor protein phosphatase activity
    		•  2.94635032478625 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine phosphatase activity
    		•  2.94635032478625 bayes_pls_golite062009
  • protein tyrosine/serine/threonine phosphatase activity
    		•  2.77531895423367 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  1.95004535887255 bayes_pls_golite062009
  • binding
    		•  1.94343241290871 bayes_pls_golite062009
  • protein binding
    		•  1.2114562222518 bayes_pls_golite062009
  • inositol or phosphatidylinositol phosphatase activity
    		•  1.1200449509328 bayes_pls_golite062009
  • catalytic activity
    		•  1.06283028154109 bayes_pls_golite062009
  • lipid phosphatase activity
    		•  1.05085928819585 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.766259791679226 bayes_pls_golite062009
  • DNA binding
    		•  0.744259483210066 bayes_pls_golite062009
  • non-membrane spanning protein tyrosine phosphatase activity
    		•  0.724257798127697 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0776644624761281 bayes_pls_golite062009
  • kinase activity
    		•  0.0715870881653981 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle