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Protein Overview: ATML1_ARATH

General Information:
Name(s) found: ATML1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 762 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: epidermal cell differentiation [IGI]
    regulation of transcription, DNA-dependent [ISS]
    cotyledon development [IGI]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    sequence-specific DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP  60
   61 NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS LEPLQVKFWF QNKRTQMKAQ 120
  121 HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE 180
  181 EIDRISAIAA KYVGKPLMAN SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF 240
  241 GSSDILRSVS IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT 300
  301 FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR ALTLEVLSTG 360
  361 VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG IWAVVDVSLD SLRPSPITRS 420
  421 RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR SVHNMYKPLV NTGLAFGAKR WVATLDRQCE 480
  481 RLASSMASNI PACDLSVITS PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD 540
  541 VRVMTRKSMD DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM 600
  601 AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI IAMNVVLSGG 660
  661 DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE GNNLEVVTTT GSCGGSLLTV 720
  721 AFQILVDSVP TAKLSLGSVA TVNSLIKCTV ERIKAALACD GA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] PSI-BLAST 17.0 Homeobox protein hox-b1
    2 View Details [121..249] deduced N/A No confident structure predictions are available.
    3 View Details [250..492] FFAS03 2.73 No description for 2r55A was found.
    4 View Details [493..626] deduced N/A No confident structure predictions are available.
    5 View Details [627..762] MSA 2.062966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle