| Protein: | ATML1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 762 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATML1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
873.0 | [0..45] | [762..1] |
|
|
839.0 | [0..3] | [762..56] |
|
|
826.0 | [0..6] | [761..31] |
|
|
825.0 | [0..27] | [761..73] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP 60
61 NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS LEPLQVKFWF QNKRTQMKAQ 120
121
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [121-249] |
1 11 21 31 41 51
| | | | | |
1 HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE 60
61 EIDRISAIAA KYVGKPLMAN SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF 120
121 GSSDILRSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-492] |
1 11 21 31 41 51
| | | | | |
1 SIPSEADKPM IVELAVAAME ELVRMAQTGD PLWVSSDNSV EILNEEEYFR TFPRGIGPKP 60
61 IGLRSEASRE STVVIMNHIN LIEILMDVNQ WSSVFCGIVS RALTLEVLST GVAGNYNGAL 120
121 QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GIWAVVDVSL DSLRPSPITR SRRRPSGCLI 180
181 QELQNGYSKV TWVEHIEVDD RSVHNMYKPL VNTGLAFGAK RWVATLDRQC ERLASSMASN 240
241 IPA
|
| Detection Method: | |
| Confidence: | 2.73 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [493-626] |
1 11 21 31 41 51
| | | | | |
1 CDLSVITSPE GRKSMLKLAE RMVMSFCTGV GASTAHAWTT LSTTGSDDVR VMTRKSMDDP 60
61 GRPPGIVLSA ATSFWIPVAP KRVFDFLRDE NSRSEWDILS NGGLVQEMAH IANGRDPGNS 120
121 VSLLRVNSGN SGQS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [627-762] |
1 11 21 31 41 51
| | | | | |
1 NMLILQESCT DASGSYVIYA PVDIIAMNVV LSGGDPDYVA LLPSGFAILP DGSARGGGGS 60
61 ANASAGAGVE GGGEGNNLEV VTTTGSCGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI 120
121 KCTVERIKAA LACDGA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
