| Protein: | ATML1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 762 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATML1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
873.0 | [0..45] | [762..1] |
|
|
839.0 | [0..3] | [762..56] |
|
|
826.0 | [0..6] | [761..31] |
|
|
825.0 | [0..27] | [761..73] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE EELQDPNQRP 60
61 NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS LEPLQVKFWF QNKRTQMKAQ 120
121
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [121-249] |
1 11 21 31 41 51
| | | | | |
1 HERHENQILK SENDKLRAEN NRYKDALSNA TCPNCGGPAA IGEMSFDEQH LRIENARLRE 60
61 EIDRISAIAA KYVGKPLMAN SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF 120
121 GSSDILRSV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.490 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.470 | a.24.26 | Description not found. |
| View | Download | 0.449 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.449 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.402 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.402 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.395 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.347 | f.56.1 | Description not found. |
|
Region A: Residues: [250-492] |
1 11 21 31 41 51
| | | | | |
1 SIPSEADKPM IVELAVAAME ELVRMAQTGD PLWVSSDNSV EILNEEEYFR TFPRGIGPKP 60
61 IGLRSEASRE STVVIMNHIN LIEILMDVNQ WSSVFCGIVS RALTLEVLST GVAGNYNGAL 120
121 QVMTAEFQVP SPLVPTRENY FVRYCKQHSD GIWAVVDVSL DSLRPSPITR SRRRPSGCLI 180
181 QELQNGYSKV TWVEHIEVDD RSVHNMYKPL VNTGLAFGAK RWVATLDRQC ERLASSMASN 240
241 IPA
|
| Detection Method: | |
| Confidence: | 2.73 |
| Match: | 2r55A |
| Description: | No description for 2r55A was found. |
|
Region A: Residues: [493-626] |
1 11 21 31 41 51
| | | | | |
1 CDLSVITSPE GRKSMLKLAE RMVMSFCTGV GASTAHAWTT LSTTGSDDVR VMTRKSMDDP 60
61 GRPPGIVLSA ATSFWIPVAP KRVFDFLRDE NSRSEWDILS NGGLVQEMAH IANGRDPGNS 120
121 VSLLRVNSGN SGQS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.614 | d.17.4 | NTF2-like |
| View | Download | 0.573 | d.110.4 | SNARE-like |
| View | Download | 0.530 | d.110.4 | SNARE-like |
| View | Download | 0.478 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.439 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.439 | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.418 | d.110.6 | Description not found. |
| View | Download | 0.414 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.394 | d.24.1 | Pili subunits |
|
Region A: Residues: [627-762] |
1 11 21 31 41 51
| | | | | |
1 NMLILQESCT DASGSYVIYA PVDIIAMNVV LSGGDPDYVA LLPSGFAILP DGSARGGGGS 60
61 ANASAGAGVE GGGEGNNLEV VTTTGSCGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI 120
121 KCTVERIKAA LACDGA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.616 | N/A | N/A | d.110.2 | GAF domain-like |
| View | Download | 0.574 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.491 | N/A | N/A | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.479 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.479 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.462 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.462 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.456 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.389 | N/A | N/A | b.43.5 | Riboflavin kinase |
| View | Download | 0.365 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.319 | N/A | N/A | d.227.1 | OsmC-like |
| View | Download | 0.305 | N/A | N/A | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.292 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.280 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.275 | N/A | N/A | d.227.1 | OsmC-like |
