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Protein Overview: TSM1_ARATH

General Information:
Name(s) found: TSM1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21593847|gb|AAM65814.1| putative S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|18408913|ref|NP_564917.1| TSM1; N1,N5,N10-tris-(5-hydroxyferuloyl)spermidine O-methyltransferase/ caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase/ caffeoyl-CoA O-methyltransferase/ tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransfe [NCBI NR]
  • gi|150421526|sp|Q9C9W4.2|CAMT2_ARATH RecName: Full=Probable caffeoyl-CoA O-methyltransferase At1g67990; AltName: Full=Trans-caffeoyl-CoA 3-O-methyltransferase; Short=CCoAOMT; Short=CCoAMT [NCBI NR]
  • gi|111074292|gb|ABH04519.1| At1g67990 [Arabidopsis thaliana] [NCBI NR]
  • Tapetum-specific methyltransferase 1 OS=Arabidopsis thaliana GN=TSM1 PE=1 SV=2 [Swiss-Prot]
  • Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2 [Swiss-Prot]
  • putative S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase [Arabidopsis thaliana]gi|18408913|ref|NP_564917.1| caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Caffeoyl-CoA 3-O-methyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | caffeoyl-CoA 3-O-methyltransferase, putative | chr1:25493157-25494412 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative S-adenosyl-L-methionine:trans-caffeoyl-Coenzyme A 3-O-methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g67990 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • O-methyltransferase/ S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATTSM1, TSM1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:25489494-25490749 FORWARD LENGTH=233 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 233 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TAS]
    Biological Process: spermidine hydroxycinnamate conjugate biosynthetic process [IDA]
    seed development [IMP]
    Molecular Function: caffeoyl-CoA O-methyltransferase activity [IDA]
    caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity [IDA]
    trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity [IDA]
    N1,N5,N10-tris-(5-hydroxyferuloyl)spermidine O-methyltransferase activity [IDA][IMP]
    tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGRLPDKGI LKSEALKQYI METTAYPREH ELLKELREAT IQRYGNLSEM GVPVDESLFL  60
   61 SMLVKIINAK NTIEIGVFTG YSLFTVALAL PEDGRITAID IDQAGYNLGL EFMKKAGVDH 120
  121 KINFIQSDAV RGLDQLLNGE KQEYDFAFVD ADKTNYVYFL EKLLKLVKVG GIIAFDNTLW 180
  181 FGTLIQKENE VPGHMRAYRE ALLEFNKILA RDPRVEIAQI SIGDGLTLCR RLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] PSI-BLAST 46.39794 Alfalfa caffeoyl coenzyme A 3-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.558878917426836 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.557560946446304 bayes_pls_golite062009
  • binding
    		•  0.348263200169904 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.0605581837493382 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle