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Protein Overview: SPF27_ARATH

General Information:
Name(s) found: SPF27_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|21593691|gb|AAM65658.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|20259667|gb|AAM14351.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18401792|ref|NP_566599.1| MOS4 (Modifier of snc1,4) [Arabidopsis thaliana] [NCBI NR]
  • gi|15292953|gb|AAK93587.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|152014429|gb|ABS20115.1| modifier of SNC1 [Arabidopsis thaliana] [NCBI NR]
  • Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1 [Swiss-Prot]
  • unknown [Arabidopsis thaliana]gi|20259667|gb|AAM14351.1| unknown protein [Arabidopsis thaliana]gi|15292953|gb|AAK93587.1| unknown protein [Arabidopsis thaliana]gi|18401792|ref|NP_566599.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: MOS4 | MOS4 (MODIFIER OF SNC1,4) | chr3:6223254-6225082 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MOS4 (Modifier of snc1,4) [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | Symbols: MOS4 | modifier of snc1,4 | chr3:6223248-6225076 FORWARD LENGTH=253 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    nucleolus [IDA]
    Biological Process: defense response signaling pathway, resistance gene-dependent [IMP]
    defense response signaling pathway, resistance gene-independent [IMP]
    defense response to fungus [IMP]
    defense response to bacterium [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNNGDVLM LEATPEAARP WASAANAEVI DALPYIDDDY GNPLIKSEVD RLVEEEMRRS  60
   61 SKKPADFLKD LPPLPKFDFK NCPVLGKEYE RVRAGKPPVR IDFESRYKLE MPPANKRNDD 120
  121 AAWKQYLQKN QRSLQQKLIE LENLELMSKL GPELWRQNNH RLEVFLTRMQ RLAQEQNEEI 180
  181 EKVNRERKYH QQTTSYELNA LSQEWRQLCV KNMEIQSACA MLETQIDSFK KEAAERGWNL 240
  241 EEKLENVEPL QMQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 10.522879 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle