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View Structure Prediction Details

Protein: SPF27_ARATH
Organism: Arabidopsis thaliana
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPF27_ARATH.

Description E-value Query
Range
Subject
Range
gi|50760411 - gi|50760411|ref|XP_418010.1| PREDICTED: similar to AMP deaminase 1 (Myoadenylate deaminase) (AMP dea...
176.0 [0..8] [239..1809]

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Predicted Domain #1
Region A:
Residues: [1-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNNGDVLM LEATPEAARP WASAANAEVI DALPYIDDDY GNPLIKSEVD RLVEEEMRRS  60
   61 SKKPADFLKD LPPLPKFDFK NCPVLGKEYE RVRAGKPPVR IDFESRYKLE MPPANKRNDD 120
  121 AAWKQYLQKN QRSLQQKLIE LENLELMSKL GPELWRQNNH RLEVFLTRMQ RLAQEQNEEI 180
  181 EKVNRERKYH QQTTSYELNA LSQEWRQLCV KNMEIQSACA MLETQIDSFK KEAAERGWNL 240
  241 EEKLENVEPL QMQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle