Protein Overview: MBD2_ARATH

General Information:
Name(s) found:	MBD2_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|42573507\|ref\|NP_974850.1\| MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase [Arabidopsis thaliana] [NCBI NR] gi\|21593605\|gb\|AAM65572.1\| unknown [Arabidopsis thaliana] [NCBI NR] gi\|15238478\|ref\|NP_198383.1\| MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase [Arabidopsis thaliana] [NCBI NR] gi\|107738396\|gb\|ABF83690.1\| At5g35330 [Arabidopsis thaliana] [NCBI NR] Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=MBD2 PE=1 SV=1 [Swiss-Prot] unknown [Arabidopsis thaliana]gi\|42573507\|ref\|NP_974850.1\| methyl-CpG-binding domain-containing protein [Arabidopsis thaliana]gi\|15238478\|ref\|NP_198383.1\| methyl-CpG-binding domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Methyl-CpG-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: MBD2, MBD02 \| MBD02 (methyl-CpG-binding domain 2); DNA binding \| chr5:13540955-13542500 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] unknown [Arabidopsis thaliana] [nr-271106-contam.fasta] MBD02; DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta] At5g35330 [Arabidopsis thaliana] [nr-271106-contam.fasta] MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase [Arabidopsis thaliana] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] \| Symbols: MBD02, MBD2, ATMBD2 \| methyl-CPG-binding domain protein 02 \| chr5:13523725-13525270 REVERSE LENGTH=272 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] \| Symbols: MBD02, MBD2 \| methyl-CPG-binding domain protein 02 \| chr5:13523725-13525270 REVERSE LENGTH=272 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta] \| Symbols: MBD02 \| methyl-CPG-binding domain protein 02 \| chr5:13523725-13525270 REVERSE LENGTH=272 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	272 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	DNA binding [ISS] [NOT]cytosine C-5 DNA demethylase activity [IDA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMSQSRAVQ RSSSPNEDRG ENQLVVYDLK GNDDTEEEVL PVQSQPLSSR TQCPSIGAFT  60
   61 VQCASCFKWR LMPSMQKYEE IREQLLENPF FCDTAREWKP DISCDVPADI YQDGTRLWAI 120
  121 DKPNISRPPA GWQRLLRIRG EGGTRFADVY YVAPSGKKLR STVEVQKYLN DNSEYIGEGV 180
  181 KLSQFSFQIP KPLQDDYVRK RPARLLDSID NTNTPVAKEA NPLAWISPDD HISLQLGTPT 240
  241 ESGLNNSHYQ PSKKKKTSTL SIFGSNDELA DR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..97]	deduced	N/A	No confident structure predictions are available.
2	View Details	[98..221]	PSI-BLAST	18.39794	Solution structure of the matrix attachment region-binding domain of chicken MeCP2
3	View Details	[222..272]	MSA	2.041994	View MSA. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: MBD2_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: