| Protein: | MBD2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 272 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBD2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
323.0 | [0..3] | [272..1] |
|
|
248.0 | [0..6] | [269..22] |
|
|
216.0 | [0..35] | [264..661] |
|
|
212.0 | [0..34] | [264..663] |
|
|
208.0 | [0..35] | [264..662] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MSMSQSRAVQ RSSSPNEDRG ENQLVVYDLK GNDDTEEEVL PVQSQPLSSR TQCPSIGAFT 60
61 VQCASCFKWR LMPSMQKYEE IREQLLENPF FCDTARE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-221] |
1 11 21 31 41 51
| | | | | |
1 WKPDISCDVP ADIYQDGTRL WAIDKPNISR PPAGWQRLLR IRGEGGTRFA DVYYVAPSGK 60
61 KLRSTVEVQK YLNDNSEYIG EGVKLSQFSF QIPKPLQDDY VRKRPARLLD SIDNTNTPVA 120
121 KEAN
|
| Detection Method: | |
| Confidence: | 18.39794 |
| Match: | 1ub1A |
| Description: | Solution structure of the matrix attachment region-binding domain of chicken MeCP2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [222-272] |
1 11 21 31 41 51
| | | | | |
1 PLAWISPDDH ISLQLGTPTE SGLNNSHYQP SKKKKTSTLS IFGSNDELAD R
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
