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Protein Overview: ASK21_ARATH

General Information:
Name(s) found: ASK21_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75155821|sp|Q8LF97.1|ASK21_ARATH RecName: Full=SKP1-like protein 21; Short=AtSK21 [NCBI NR]
  • gi|21537190|gb|AAM61531.1| putative SKP1-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18411999|ref|NP_567113.1| ASK21 (ARABIDOPSIS SKP1-LIKE 21); protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] [NCBI NR]
  • SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1 [Swiss-Prot]
  • putative SKP1-like protein [Arabidopsis thaliana]gi|18411999|ref|NP_567113.1| SKP1 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 SKP1 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ASK21 | ASK21 (ARABIDOPSIS SKP1-LIKE 21); ubiquitin-protein ligase | chr3:22733937-22736552 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ASK21; ubiquitin-protein ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative SKP1-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ASK21, SK21 | SKP1-like 21 | chr3:22722962-22725577 REVERSE LENGTH=351 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: SCF ubiquitin ligase complex [ISS]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin-protein ligase activity [ISS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEGEMAIIK PEMMKSYIWL ETADGSIQQV EQEVAMFCPM ICQEVIQKGV GSSKNYAISL  60
   61 PQRVNPAMLS LIFDYCRFHQ VPGRSNKERK VYDEKFIRMD TKRLCELTSA ADSLQLKPLV 120
  121 DLTSRALARI IEGKTPEEIR EIFHLPDDLT EEEKLEPLKN TMDDPRIRLL NRLYAKKRKE 180
  181 LKEREKLKSV EVEEHVDERS VDDLLSFING RDPKVVKTSK SKKKNKKRKE QKNGSSNGTC 240
  241 EALEKDLHNL DSKSQSAEIV DNTASCLGDV SNLPSMEDDI FTPKTEFEDG YIDDEIDPAL 300
  301 KELLDREVED FARRLNSSWV LSIGQERQPV NFSINGNGTS RRLTGPAAGH K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 58.30103 Cyclin A/CDK2-associated p45, Skp1
    2 View Details [164..260] MSA 6.01199 View MSA. No confident structure predictions are available.
    3 View Details [261..351] MSA 1.003989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle