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Protein Overview: IDN2_ARATH

General Information:
Name(s) found: IDN2_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein INVOLVED IN DE NOVO 2 OS=Arabidopsis thaliana GN=IDN2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 647 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA methylation [IGI][IMP]
    response to cadmium ion [IEP]
    chromatin silencing [IGI]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTVILSSD DEDSDISESE MDEYGDKMYL NLKGGKLKVR LSPQAFICPY CPNKKKTSFQ  60
   61 YKDLLQHASG VGNSNSDKRS AKEKASHLAL VKYLQQDLAD SASEAEPSSK RQKNGNPIQD 120
  121 CDHDEKLVYP WKGIVVNIPT TKAQDGRSAG ESGSKLRDEY ILRGFNPTRV RPLWNYLGHS 180
  181 GTAIVEFNKD WNGLHNGLLF DKAYTVDGHG KKDWLKKDGP KLGLYGWIAR ADDYNGNNII 240
  241 GENLRKTGDL KTIAELTEEE ARKQELLVQN LRQLVEEKKK DMKEIEELCS VKSEELNQLM 300
  301 EEKEKNQQKH YRELNAIQER TMSHIQKIVD DHEKLKRLLE SERKKLEIKC NELAKREVHN 360
  361 GTERMKLSED LEQNASKNSS LELAAMEQQK ADEEVKKLAE DQRRQKEELH EKIIRLERQR 420
  421 DQKQAIELEV EQLKGQLNVM KHMASDGDAE VVKEVDIIFK DLGEKEAQLA DLDKFNQTLI 480
  481 LRERRTNDEL QEAHKELVNI MKEWNTNIGV KRMGELVTKP FVDAMQQKYC QQDVEDRAVE 540
  541 VLQLWEHYLK DSDWHPFKRV KLENEDREVE VIDDRDEKLR ELKADLGDGP YNAVTKALLE 600
  601 INEYNPSGRY ITTELWNFKA DKKATLEEGV TCLLDQWEKA KRKRGMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] deduced N/A No confident structure predictions are available.
    2 View Details [121..189] Pfam 23.408935 No description for PF03468.5 was found. No confident structure predictions are available.
    3 View Details [190..513] PSI-BLAST 17.045757 Heavy meromyosin subfragment
    4 View Details [514..647] Pfam 79.657577 No description for PF03469.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle