YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NUP62_ARATH

General Information:
Name(s) found: NUP62_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Nuclear pore complex protein NUP62 OS=Arabidopsis thaliana GN=NUP62 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 739 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    nuclear pore [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: structural constituent of nuclear pore [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFPFGQSN SVGGFSFGSS SATNSSSASS TTSPLSFSFN QSSNPSSTGF GFGSSVSSTP  60
   61 ASSTTPSFGF GASSTPSFGF GSSASSSTPS FGFGSSASVT PASTTPSFGF GTAASSSAPA 120
  121 PSLFGSSTTN ASSAAPGSSP FGFVTSSASS TATPSSSLFG APASSAATPS SSPFGAAPAS 180
  181 GSTPLFGSSP SLFSAPSSAS ASNSSLFGAS SSAATSTSPL FGAPSSATGA TPSFSVASSA 240
  241 PGSSSSIFGA TGSSPSFSVA SSASGSSPSI FGATGSSPFF GSSSSAGSTP SLFASSSSGA 300
  301 TTSSPSPFGV STFNSSSTSN TSNASASPFS ASTGFSFLKS TASSTTSSTT PSAPPQTASS 360
  361 SSSFSFGTSA NSGFNLSTGS SAAPASSTSG AVFSIATTTT TSSSTPAATS APASSAPAST 420
  421 MAFPSFGVTS SATNTTPASS AATFSTTGFG LASSTPATGS TNSFTGFAVP KTSTPASSSQ 480
  481 PQTTSPAFSF SLPSSTSTTA PATSSATTTQ TTLVVPSSSG TSTAVAPVAG SPKLPSEITG 540
  541 KTVEEIIKEW NTELQERTGR FRKQANAIAE WDKRILQNRD VLLRLEIEVA KVVETQSSLE 600
  601 RQLELIETHQ QEVDKALQSM EEEAERIYND ERKSLLDDEA ASTRDAMYEQ SELVERELEH 660
  661 MTEQIRSIIQ SVNANQGGEL EAIDGMSPLD VVVRILNNQL SSLMWIDEKA EEFSSRIQKI 720
  721 ALQGSGGDRE LMAPKHWMS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] MSA 3.156993 View MSA. No confident structure predictions are available.
    2 View Details [208..310] deduced N/A No confident structure predictions are available.
    3 View Details [311..452] MSA 3.162984 View MSA. No confident structure predictions are available.
    4 View Details [453..537] deduced N/A No confident structure predictions are available.
    5 View Details [538..739] PSI-BLAST 8.154902 C-terminal domain of PLC-beta


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle