| Protein: | NUP62_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 739 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP62_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
199.0 | [0..4] | [566..1019] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MSGFPFGQSN SVGGFSFGSS SATNSSSASS TTSPLSFSFN QSSNPSSTGF GFGSSVSSTP 60
61 ASSTTPSFGF GASSTPSFGF GSSASSSTPS FGFGSSASVT PASTTPSFGF GTAASSSAPA 120
121 PSLFGSSTTN ASSAAPGSSP FGFVTSSASS TATPSSSLFG APASSAATPS SSPFGAAPAS 180
181 GSTPLFGSSP SLFSAPSSAS ASNSSLF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-310] |
1 11 21 31 41 51
| | | | | |
1 GASSSAATST SPLFGAPSSA TGATPSFSVA SSAPGSSSSI FGATGSSPSF SVASSASGSS 60
61 PSIFGATGSS PFFGSSSSAG STPSLFASSS SGATTSSPSP FGV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [311-452] |
1 11 21 31 41 51
| | | | | |
1 STFNSSSTSN TSNASASPFS ASTGFSFLKS TASSTTSSTT PSAPPQTASS SSSFSFGTSA 60
61 NSGFNLSTGS SAAPASSTSG AVFSIATTTT TSSSTPAATS APASSAPAST MAFPSFGVTS 120
121 SATNTTPASS AATFSTTGFG LA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [453-537] |
1 11 21 31 41 51
| | | | | |
1 SSTPATGSTN SFTGFAVPKT STPASSSQPQ TTSPAFSFSL PSSTSTTAPA TSSATTTQTT 60
61 LVVPSSSGTS TAVAPVAGSP KLPSE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [538-739] |
1 11 21 31 41 51
| | | | | |
1 ITGKTVEEII KEWNTELQER TGRFRKQANA IAEWDKRILQ NRDVLLRLEI EVAKVVETQS 60
61 SLERQLELIE THQQEVDKAL QSMEEEAERI YNDERKSLLD DEAASTRDAM YEQSELVERE 120
121 LEHMTEQIRS IIQSVNANQG GELEAIDGMS PLDVVVRILN NQLSSLMWID EKAEEFSSRI 180
181 QKIALQGSGG DRELMAPKHW MS
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1jadA |
| Description: | C-terminal domain of PLC-beta |
Matching Structure (courtesy of the PDB): |
|
