YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|22136904, gi|...

General Information:
Name(s) found: gi|30695767 [NCBI NR]
gi|22136904 [NCBI NR]
gi|18176035 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|30695767|ref|NP_191888.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22136904|gb|AAM91796.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18176035|gb|AAL59972.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|18176035|gb|AAL59972.1| unknown protein [Arabidopsis thaliana]gi|30695767|ref|NP_191888.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22570.1); contains domain PTHR10209 (PTHR10209); contains domain SSF51197 (SSF51197); contains domain G3DSA:2.60 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G13400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22570.1); contains domain PTHR10209 (PTHR10209); contains domain SSF51197 (SSF51197); contains domain G3DSA:2.60.120.330 (G3DSA:2.60.120.330) | chr3:23392688-23394034 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr3:23381713-23383059 FORWARD LENGTH=403 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 2OG-Fe(II) oxygenase domain-containing protein OS=Arabidopsis thaliana GN=At3g63290 PE=2 SV=1 [ARATH-contam.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Arabidopsis thaliana GN=At3g63290 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: pollen development [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETEILEPY QLSFSDLLLS SRNRSQWISK NVMDALGPTG PGLLCITGVL GSAFLRRKLL  60
   61 PMARKLALLD PDKRKLILME HHLGSDVPLK NPERDVSSFA MQLNYERTTY KSSLGKLWFD 120
  121 EAGSKLDLQE DDDDAFTNLG GAFKELGFCM RELGLSIARL CDREIGGGLL EESLLDSCTA 180
  181 KGRLIHYHSA ADKYALRESQ RRNQSGNRVS SKRRVQNAAE QELNRRNGAG LSGSHFNLWQ 240
  241 QWHYDYGIFT VLTDPMFLSP YSYQEFSLMS SHSYLQIYHP SKNKFYMVKT PQDSFLVQIG 300
  301 ESADILSKGK LRSTLHCVCK PEKLDHVSRE TFVVFLHPKW SQTFSVSEYT MEHLRSDEVV 360
  361 PRPDLQNIVP PLSSRLRDGM TFAEFSRETT KQYYGGNGLQ SNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 67.0 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.391261742890951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.30

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle