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View Structure Prediction Details

Protein: gi|22136904, gi|...
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22136904, gi|....

Description E-value Query
Range
Subject
Range
gi|30519873 - gi|30519873|dbj|BAC76428.1| gibberellin 20-oxidase [Nicotiana tabacum]
269.0 [0..9] [392..59]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETEILEPY QLSFSDLLLS SRNRSQWISK NVMDALGPTG PGLLCITGVL GSAFLRRKLL  60
   61 PMARKLALLD PDKRKLILME HHLGSDVPLK NPERDVSSFA MQLNYERTTY KSSLGKLWFD 120
  121 EAGSKLDLQE DDDDAFTNLG GAFKELGFCM RELGLSIARL CDREIGGGLL EESLLDSCTA 180
  181 KGRLIHYHSA ADKYALRESQ RRNQSGNRVS SKRRVQNAAE QELNRRNGAG LSGSHFNLWQ 240
  241 QWHYDYGIFT VLTDPMFLSP YSYQEFSLMS SHSYLQIYHP SKNKFYMVKT PQDSFLVQIG 300
  301 ESADILSKGK LRSTLHCVCK PEKLDHVSRE TFVVFLHPKW SQTFSVSEYT MEHLRSDEVV 360
  361 PRPDLQNIVP PLSSRLRDGM TFAEFSRETT KQYYGGNGLQ SNR

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Detection Method: PSI-BLAST
Confidence: 67.0
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.391261742890951 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle