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Protein Overview: CCD8_ARATH

General Information:
Name(s) found: CCD8_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis thaliana GN=CCD8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [NAS][RCA]
    Biological Process: auxin polar transport [IMP]
    carotene catabolic process [IDA]
    [NOT]auxin metabolic process [IMP]
    xanthophyll catabolic process [IDA]
    leaf morphogenesis [IMP]
    secondary shoot formation [IGI][IMP]
    response to auxin stimulus [IMP]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLITTKAM MSHHHVLSST RITTLYSDNS IGDQQIKTKP QVPHRLFARR IFGVTRAVIN  60
   61 SAAPSPLPEK EKVEGERRCH VAWTSVQQEN WEGELTVQGK IPTWLNGTYL RNGPGLWNIG 120
  121 DHDFRHLFDG YSTLVKLQFD GGRIFAAHRL LESDAYKAAK KHNRLCYREF SETPKSVIIN 180
  181 KNPFSGIGEI VRLFSGESLT DNANTGVIKL GDGRVMCLTE TQKGSILVDH ETLETIGKFE 240
  241 YDDVLSDHMI QSAHPIVTET EMWTLIPDLV KPGYRVVRME AGSNKREVVG RVRCRSGSWG 300
  301 PGWVHSFAVT ENYVVIPEMP LRYSVKNLLR AEPTPLYKFE WCPQDGAFIH VMSKLTGEVV 360
  361 ASVEVPAYVT FHFINAYEED KNGDGKATVI IADCCEHNAD TRILDMLRLD TLRSSHGHDV 420
  421 LPDARIGRFR IPLDGSKYGK LETAVEAEKH GRAMDMCSIN PLYLGQKYRY VYACGAQRPC 480
  481 NFPNALSKVD IVEKKVKNWH EHGMIPSEPF FVPRPGATHE DDGVVISIVS EENGGSFAIL 540
  541 LDGSSFEEIA RAKFPYGLPY GLHGCWIPKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..570] PSI-BLAST 122.0 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle