| Protein: | CCD8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 570 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCD8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
603.0 | [0..3] | [570..43] |
|
Region A: Residues: [1-570] |
1 11 21 31 41 51
| | | | | |
1 MASLITTKAM MSHHHVLSST RITTLYSDNS IGDQQIKTKP QVPHRLFARR IFGVTRAVIN 60
61 SAAPSPLPEK EKVEGERRCH VAWTSVQQEN WEGELTVQGK IPTWLNGTYL RNGPGLWNIG 120
121 DHDFRHLFDG YSTLVKLQFD GGRIFAAHRL LESDAYKAAK KHNRLCYREF SETPKSVIIN 180
181 KNPFSGIGEI VRLFSGESLT DNANTGVIKL GDGRVMCLTE TQKGSILVDH ETLETIGKFE 240
241 YDDVLSDHMI QSAHPIVTET EMWTLIPDLV KPGYRVVRME AGSNKREVVG RVRCRSGSWG 300
301 PGWVHSFAVT ENYVVIPEMP LRYSVKNLLR AEPTPLYKFE WCPQDGAFIH VMSKLTGEVV 360
361 ASVEVPAYVT FHFINAYEED KNGDGKATVI IADCCEHNAD TRILDMLRLD TLRSSHGHDV 420
421 LPDARIGRFR IPLDGSKYGK LETAVEAEKH GRAMDMCSIN PLYLGQKYRY VYACGAQRPC 480
481 NFPNALSKVD IVEKKVKNWH EHGMIPSEPF FVPRPGATHE DDGVVISIVS EENGGSFAIL 540
541 LDGSSFEEIA RAKFPYGLPY GLHGCWIPKD
|
| Detection Method: |  |
| Confidence: | 122.0 |
| Match: | 2biwA |
| Description: | Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme |
Matching Structure (courtesy of the PDB): |
|
