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Protein Overview: gi|18412316, gi|...

General Information:
Name(s) found: gi|21280817 [NCBI NR]
gi|18412316 [NCBI NR]
gi|11908126 [NCBI NR]
Description(s) found:
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  • gi|21280817|gb|AAM44922.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18412316|ref|NP_565205.1| ECT8 (evolutionarily conserved C-terminal region 8) [Arabidopsis thaliana] [NCBI NR]
  • gi|11908126|gb|AAG41492.1|AF326910_1 unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|11908126|gb|AAG41492.1| unknown protein [Arabidopsis thaliana]gi|18412316|ref|NP_565205.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: ECT8 | ECT8 (evolutionarily conserved C-terminal region 8) | chr1:29821050-29823704 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ECT8 | evolutionarily conserved C-terminal region 8 | chr1:29816157-29818811 FORWARD LENGTH=528 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g79270 OS=Arabidopsis thaliana GN=ECT8 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 528 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG  60
   61 LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM QGENGSVIYL MPGFQSYDAS 120
  121 QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP 180
  181 LKQNISSSSH NHNNYYSKSK NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM 240
  241 DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV 300
  301 GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES 360
  361 QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS MEFWQQDKWT GYFPVKWHII 420
  421 KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN 480
  481 REKVMVQKKL RFPPVLKKKE EDLVADFKTM EMSNTVEEGN TELTGTVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] PSI-BLAST 5.522879 Sec24
    2 View Details [234..288] deduced N/A No confident structure predictions are available.
    3 View Details [289..528] PSI-BLAST 51.30103 No description for 2yudA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle