| Protein: | gi|18412316, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 528 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18412316, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
370.0 | [0..43] | [528..45] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG 60
61 LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM QGENGSVIYL MPGFQSYDAS 120
121 QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP 180
181 LKQNISSSSH NHNNYYSKSK NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEK
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-288] |
1 11 21 31 41 51
| | | | | |
1 GRIAYPMDPV KKKSGALNRD ETEKAKARTK ENGTSMNDLA NGQDHITNGE CESCS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [289-528] |
1 11 21 31 41 51
| | | | | |
1 LDAEGNERSN GVGSVIRRDQ YNLPSFQTKY EEAIFFVIKS YSEDDIHKSI KYNVWSSTLN 60
61 GNKKLDSAYQ ESQKKAADKS GKCPVFLFFS VNASGQFCGV AEMIGRVDYE KSMEFWQQDK 120
121 WTGYFPVKWH IIKDVPNPQL RHIILENNEN KPVTNSRDTQ EVRLPQGNEV LNIFKNYAAK 180
181 TSILDDFDFY ENREKVMVQK KLRFPPVLKK KEEDLVADFK TMEMSNTVEE GNTELTGTVS 240
241
|
| Detection Method: | |
| Confidence: | 51.30103 |
| Match: | 2yudA |
| Description: | No description for 2yudA was found. |
