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Protein Overview: DEGP5_ARATH

General Information:
Name(s) found: DEGP5_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    chloroplast thylakoid lumen [IDA]
    thylakoid [IDA]
    Biological Process: proteolysis [ISS]
    photosystem II repair [IMP]
    Molecular Function: catalytic activity [IEA]
    serine-type peptidase activity [ISS]
    serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG  60
   61 SNQQRLPMES AIALEQFKEK EEELEEEEER NVNLFQKTSP SVVYIEAIEL PKTSSGDILT 120
  121 DEENGKIEGT GSGFVWDKLG HIVTNYHVIA KLATDQFGLQ RCKVSLVDAK GTRFSKEGKI 180
  181 VGLDPDNDLA VLKIETEGRE LNPVVLGTSN DLRVGQSCFA IGNPYGYENT LTIGVVSGLG 240
  241 REIPSPNGKS ISEAIQTDAD INSGNSGGPL LDSYGHTIGV NTATFTRKGS GMSSGVNFAI 300
  301 PIDTVVRTVP YLIVYGTAYR DRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..323] PSI-BLAST 53.0 Protease Do (DegP, HtrA), catalytic domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle