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Protein Overview: IF4G1_ARATH

General Information:
Name(s) found: IF4G1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30696956|ref|NP_851207.1| eukaryotic translation initiation factor 4F, putative / eIF-4F, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|20258963|gb|AAM14197.1| putative eukaryotic initiation factor 4 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810455|gb|AAL07115.1| putative eukaryotic initiation factor eIF4 [Arabidopsis thaliana] [NCBI NR]
  • Eukaryotic translation initiation factor isoform 4G-1 OS=Arabidopsis thaliana GN=EIF(ISO)4G1 PE=1 SV=1 [Swiss-Prot]
  • putative eukaryotic initiation factor 4 [Arabidopsis thaliana]gi|15810455|gb|AAL07115.1| putative eukaryotic initiation factor eIF4 [Arabidopsis thaliana]gi|30696956|ref|NP_851207.1| eukaryotic translation initiation factor 4F, putative / eIF-4F, putati [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic translation initiation factor 4F [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | chr5:23456981-23460659 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative eukaryotic initiation factor 4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RNA binding / translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative eukaryotic initiation factor eIF4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: eIFiso4G1 | MIF4G domain-containing protein / MA3 domain-containing protein | chr5:23439755-23443433 FORWARD LENGTH=780 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 780 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: RNA metabolic process [IEA]
    translational initiation [ISS]
    translation [ISS]
    Molecular Function: translation initiation factor activity [ISS]
    protein binding [IEA]
    RNA binding [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQGDQTVLS LRPGGGRGNR LFGSSSSSSS LSFGSLSSSD LPLLRPHGGA PASSFPFKGG  60
   61 DSRFDGRERV KYTREQLLEL KETTQLSDEI LRVQRETAAE LFGEEGTWAR GESVVSNLVP 120
  121 VQSASRFSEP DSRDWRSRST QPPPSGEERS WDNLREAKDS RYVEASQYNR QDQPNSQFSR 180
  181 ANISSNQGGG PAPVLVKAEV PWSARRGNLS ENDRVLKTVK GILNKLTPEK YDLLKGQLIE 240
  241 SGITSADILK GVITLIFDKA VLEPTFCPMY AKLCSDINDQ LPTFPPAEPG DKEITFKRVL 300
  301 LNICQEAFEG ASQLREELRQ MSAPDQEAER NDKEKLLKLK TLGNIRLIGE LLKQKMVPEK 360
  361 IVHHIVQELL GADEKVCPAE ENVEAICHFF KTIGKQLDGN VKSKRINDVY FKRLQALSKN 420
  421 PQLELRLRFM VQNIIDMRSN GWVPRREEMK ARTITEIHTE AEKNLGLRPG ATANMRRGMV 480
  481 SSGGPVSPGP VYPGGRPGAG GLMPGMPGTR RMPGMPGVDN DNWEVPRTRS MSRRDGPGPL 540
  541 HSPAVSKSAS MNTRLLPQGS SGIMSGKTSA LLQGSGSVSR PVTVSAERPA QSVAPLTVPV 600
  601 PVEKPQPSGP KLSEEVLQRK TKSLLEEYFN VRLLGEALQC VEELGLPSYH PEFVKEAISL 660
  661 SLEKSPPVVE PIATLLEYLL SKKVVAPKDL ETGFLLYGAM LDDIGIDLPK APNNFGEIVG 720
  721 KLILAGGVDF KLVREIIGKM EDDRFQKMVV DAAVRIVESS EQGKSLLASQ AADIEACRNL 780
  781

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 9.69897 Solution structure of the yeast translation initiation factor eIF4E in complex with m7GDP and eIF4GI residues 393 to 490
    2 View Details [143..217] deduced N/A No confident structure predictions are available.
    3 View Details [218..484] PSI-BLAST 64.30103 Eukaryotic initiation factor eIF4G
    4 View Details [485..557] deduced N/A No confident structure predictions are available.
    5 View Details [558..780] PSI-BLAST 41.39794 C-terminal portion of human eIF4GI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle