| Protein: | IF4G1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 780 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IF4G1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
635.0 | [0..1] | [780..1] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MQQGDQTVLS LRPGGGRGNR LFGSSSSSSS LSFGSLSSSD LPLLRPHGGA PASSFPFKGG 60
61 DSRFDGRERV KYTREQLLEL KETTQLSDEI LRVQRETAAE LFGEEGTWAR GESVVSNLVP 120
121 VQSASRFSEP DSRDWRSRST QP
|
| Detection Method: |  |
| Confidence: | 9.69897 |
| Match: | 1rf8B |
| Description: | Solution structure of the yeast translation initiation factor eIF4E in complex with m7GDP and eIF4GI residues 393 to 490 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [143-217] |
1 11 21 31 41 51
| | | | | |
1 PPSGEERSWD NLREAKDSRY VEASQYNRQD QPNSQFSRAN ISSNQGGGPA PVLVKAEVPW 60
61 SARRGNLSEN DRVLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [218-484] |
1 11 21 31 41 51
| | | | | |
1 TVKGILNKLT PEKYDLLKGQ LIESGITSAD ILKGVITLIF DKAVLEPTFC PMYAKLCSDI 60
61 NDQLPTFPPA EPGDKEITFK RVLLNICQEA FEGASQLREE LRQMSAPDQE AERNDKEKLL 120
121 KLKTLGNIRL IGELLKQKMV PEKIVHHIVQ ELLGADEKVC PAEENVEAIC HFFKTIGKQL 180
181 DGNVKSKRIN DVYFKRLQAL SKNPQLELRL RFMVQNIIDM RSNGWVPRRE EMKARTITEI 240
241 HTEAEKNLGL RPGATANMRR GMVSSGG
|
| Detection Method: | |
| Confidence: | 64.30103 |
| Match: | 1hu3A |
| Description: | Eukaryotic initiation factor eIF4G |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
|
Region A: Residues: [485-557] |
1 11 21 31 41 51
| | | | | |
1 PVSPGPVYPG GRPGAGGLMP GMPGTRRMPG MPGVDNDNWE VPRTRSMSRR DGPGPLHSPA 60
61 VSKSASMNTR LLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [558-780] |
1 11 21 31 41 51
| | | | | |
1 QGSSGIMSGK TSALLQGSGS VSRPVTVSAE RPAQSVAPLT VPVPVEKPQP SGPKLSEEVL 60
61 QRKTKSLLEE YFNVRLLGEA LQCVEELGLP SYHPEFVKEA ISLSLEKSPP VVEPIATLLE 120
121 YLLSKKVVAP KDLETGFLLY GAMLDDIGID LPKAPNNFGE IVGKLILAGG VDFKLVREII 180
181 GKMEDDRFQK MVVDAAVRIV ESSEQGKSLL ASQAADIEAC RNL
|
| Detection Method: | |
| Confidence: | 41.39794 |
| Match: | 1ug3A |
| Description: | C-terminal portion of human eIF4GI |
Matching Structure (courtesy of the PDB): |
|
